PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG016710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 262aa    MW: 28824.5 Da    PI: 6.8876
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG016710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-1683134155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a++k++g
  TRIDC4AG016710.3  83 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 134
                       78****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
FMLANLATMR GLLFSLLGGG YEKEDRAARA YDLAALKYWG VNATTNFPKE NYIRELEEMQ  60
NMSRHELVAS LRRKSSGFSR GASVYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFATEEE  120
AAEAYDIAAL KFRGDNAVTN FEPSRYNLEA IACSDLPVNG RRMSSHKPTA AAAPEAQGEI  180
TFVSSAPPIP QQSCSDVQVP PYVLHGLLQL QASEPLHALP LSSYSFGEPS FYWPFGDVEQ  240
KVQLDSKVEV AGGILQLANS AV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.18e-56AP2 family protein