PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG016550.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 198aa MW: 22747.1 Da PI: 11.1074 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.9 | 4.9e-18 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd lv++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4AG016550.3 20 RGPWTVEEDIVLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 67 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4AG016550.3 73 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116 7889******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MAHERDSSSE EEVMAGDLRR GPWTVEEDIV LVNYIAAHGE GRWNSLARSA GLKRTGKSCR 60 LRWLNYLRPD LRRGSITPQE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK 120 HAKQLKCDVN SQQFKDVMRY LWMPRLVERI QAAATADARS TPPWPAGSCP TPRSRSCRAL 180 LPPALPRRPP RTLAPAPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 8e-86 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG016550.3 |