PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG014690.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 223aa    MW: 23918.2 Da    PI: 6.4907
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG014690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.72.5e-40521511100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCkvlrr+Ca++C+lapyfp + p+kf  +h++FGasn++kll++lpe+ r da+ss+vyeAear+rdPvyG++g++ +lq++ ++lk++
  TRIDC4AG014690.1  52 PCAACKVLRRRCADGCMLAPYFPPTGPAKFTTAHRVFGASNIIKLLQDLPESSRADAVSSMVYEAEARLRDPVYGCAGTVCRLQKEANELKVD 144
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       la++++ 
  TRIDC4AG014690.1 145 LARAQAD 151
                       **99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MDYSNEATIT AAAQPYGRSM SPPSRVSSCS PPPVFPLMGN APSSPPTIVL SPCAACKVLR  60
RRCADGCMLA PYFPPTGPAK FTTAHRVFGA SNIIKLLQDL PESSRADAVS SMVYEAEARL  120
RDPVYGCAGT VCRLQKEANE LKVDLARAQA DLLSIQTQHA NLLALVCVEF AANHRGDQQL  180
HQPPPLGDQL NGIGGSGGGA MYQPLYNSDF DSAPWEEARQ LWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-61LBD family protein