PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011440.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 692aa MW: 76630.1 Da PI: 6.827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.3	4.6e-27	49	139	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY+ YA+++GF++r+s+ ++s+++++i++r+ vCskeg++e+++ + ++++++r+ tr+gCka++++kk + gkw+vtk+++ HnH TRIDC4AG011440.9 49 DFYSLYARHAGFRIRISRYTRSRHDNSIISRRIVCSKEGFHETRNCEglhPDQKQQERTGTRVGCKAMIMIKKIDPGKWVVTKFVKTHNHG 139 6*****************************************9999999999**********************************6 PP
2	FAR1	89.4	5.1e-28	187	279	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4AG011440.9 187 FYINYARLNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 279 9***************************************99999998899999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MEGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF 60 RIRISRYTRS RHDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK 120 KIDPGKWVVT KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS 180 EEAAKLFYIN YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT 240 KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAEFAA 300 KSSDPDEVKV EEYSAGIQCN STDSLTVLYN QLCQEAIKFA KEGSVTEEIY HVAMSALKEA 360 AEKVAQVKSC HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTTPS QLTVFQESVS 420 KLMFIPTNLL TDSGLANSDS NHPSLCAFTS SGRQCGHGSE CSYLHAENRK EDCPEKYQNS 480 TSSRATQGNH STYHGHSEET TVAIPAIPLT LHMPLPRNSP GASADGQYKL LAAPIEAVPI 540 SYRPAEPIRQ PKRSFCNLGP LPGVMSELTR QEKGPHPLVH ATALACGARV VPVEEAASLI 600 KAIESKIRSG GAKIARLPSS RLTRLVPEAI SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ 660 ISEEMKLQGE ASELETDFEN CSGHENHDTA DC

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MEGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF  60
RIRISRYTRS RHDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK  120
KIDPGKWVVT KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS  180
EEAAKLFYIN YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT  240
KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAEFAA  300
KSSDPDEVKV EEYSAGIQCN STDSLTVLYN QLCQEAIKFA KEGSVTEEIY HVAMSALKEA  360
AEKVAQVKSC HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTTPS QLTVFQESVS  420
KLMFIPTNLL TDSGLANSDS NHPSLCAFTS SGRQCGHGSE CSYLHAENRK EDCPEKYQNS  480
TSSRATQGNH STYHGHSEET TVAIPAIPLT LHMPLPRNSP GASADGQYKL LAAPIEAVPI  540
SYRPAEPIRQ PKRSFCNLGP LPGVMSELTR QEKGPHPLVH ATALACGARV VPVEEAASLI  600
KAIESKIRSG GAKIARLPSS RLTRLVPEAI SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ  660
ISEEMKLQGE ASELETDFEN CSGHENHDTA DC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-36	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.9