PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011440.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 448aa MW: 48435.3 Da PI: 6.2887

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.3	2.2e-12	2	35	57	90
FAR1 57 etrtgCkaklkvkkekdgkwevtkleleHnHela 90 tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4AG011440.3 2 ITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 35 68*****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MITRVGCKAM IVVKKMNSGK WMVSKFEKEH NHSLLSSKQA PSTSNITSGE NAEFAAKSSD 60 PDEVKVEEYS AGIQCNSTDS LTVLYNQLCQ EAIKFAKEGS VTEEIYHVAM SALKEAAEKV 120 AQVKSCHPIM PHRGVSGSES KHKVVQMKTM SASQCSDVAK QKTTPSQLTV FQESVSKLMF 180 IPTNLLTDSG LANSDSNHPS LCAFTSSGRQ CGHGSECSYL HAENRKEDCP EKYQNSTSSR 240 ATQGNHSTYH GHSEETTVAI PAIPLTLHMP LPRNSPGASA DGQYKLLAAP IEAVPISYRP 300 AEPIRQPKRS FCNLGPLPGV MSELTRQEKG PHPLVHATAL ACGARVVPVE EAASLIKAIE 360 SKIRSGGAKI ARLPSSRLTR LVPEAISMSS SSEDGEENDH SEPPAVNVEG YCHDDQISEE 420 MKLQGEASEL ETDFENCSGH ENHDTADC

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MITRVGCKAM IVVKKMNSGK WMVSKFEKEH NHSLLSSKQA PSTSNITSGE NAEFAAKSSD  60
PDEVKVEEYS AGIQCNSTDS LTVLYNQLCQ EAIKFAKEGS VTEEIYHVAM SALKEAAEKV  120
AQVKSCHPIM PHRGVSGSES KHKVVQMKTM SASQCSDVAK QKTTPSQLTV FQESVSKLMF  180
IPTNLLTDSG LANSDSNHPS LCAFTSSGRQ CGHGSECSYL HAENRKEDCP EKYQNSTSSR  240
ATQGNHSTYH GHSEETTVAI PAIPLTLHMP LPRNSPGASA DGQYKLLAAP IEAVPISYRP  300
AEPIRQPKRS FCNLGPLPGV MSELTRQEKG PHPLVHATAL ACGARVVPVE EAASLIKAIE  360
SKIRSGGAKI ARLPSSRLTR LVPEAISMSS SSEDGEENDH SEPPAVNVEG YCHDDQISEE  420
MKLQGEASEL ETDFENCSGH ENHDTADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-12	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.3