PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG011440.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 671aa MW: 74183.4 Da PI: 6.9403

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70	5.7e-22	38	118	11	88
FAR1 11 GFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 GF++r+s+ ++s+++++i++r+ vCskeg++e+++ + ++++++r+ tr+gCka++++kk + gkw+vtk+++ HnH TRIDC4AG011440.2 38 GFRIRISRYTRSRHDNSIISRRIVCSKEGFHETRNCEglhPDQKQQERTGTRVGCKAMIMIKKIDPGKWVVTKFVKTHNHG 118 9*******************************9999999999**********************************6 PP
2	FAR1	89.4	4.9e-28	166	258	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4AG011440.2 166 FYINYARLNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 258 9***************************************99999998899999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MEGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGFR IRISRYTRSR HDNSIISRRI 60 VCSKEGFHET RNCEGLHPDQ KQQERTGTRV GCKAMIMIKK IDPGKWVVTK FVKTHNHGSV 120 PPRKLDIRSA HQDLNPVEKP HSTEEDSVEE PAEGMEFDSE EAAKLFYINY ARLNGFRARI 180 SRYCRSRRDN SIISRQIVCS KEGFREVRAK KEITDEGKTK RPRMITRVGC KAMIVVKKMN 240 SGKWMVSKFE KEHNHSLLSS KQAPSTSNIT SGENAEFAAK SSDPDEVKVE EYSAGIQCNS 300 TDSLTVLYNQ LCQEAIKFAK EGSVTEEIYH VAMSALKEAA EKVAQVKSCH PIMPHRGVSG 360 SESKHKVVQM KTMSASQCSD VAKQKTTPSQ LTVFQESVSK LMFIPTNLLT DSGLANSDSN 420 HPSLCAFTSS GRQCGHGSEC SYLHAENRKE DCPEKYQNST SSRATQGNHS TYHGHSEETT 480 VAIPAIPLTL HMPLPRNSPG ASADGQYKLL AAPIEAVPIS YRPAEPIRQP KRSFCNLGPL 540 PGVMSELTRQ EKGPHPLVHA TALACGARVV PVEEAASLIK AIESKIRSGG AKIARLPSSR 600 LTRLVPEAIS MSSSSEDGEE NDHSEPPAVN VEGYCHDDQI SEEMKLQGEA SELETDFENC 660 SGHENHDTAD C

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MEGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGFR IRISRYTRSR HDNSIISRRI  60
VCSKEGFHET RNCEGLHPDQ KQQERTGTRV GCKAMIMIKK IDPGKWVVTK FVKTHNHGSV  120
PPRKLDIRSA HQDLNPVEKP HSTEEDSVEE PAEGMEFDSE EAAKLFYINY ARLNGFRARI  180
SRYCRSRRDN SIISRQIVCS KEGFREVRAK KEITDEGKTK RPRMITRVGC KAMIVVKKMN  240
SGKWMVSKFE KEHNHSLLSS KQAPSTSNIT SGENAEFAAK SSDPDEVKVE EYSAGIQCNS  300
TDSLTVLYNQ LCQEAIKFAK EGSVTEEIYH VAMSALKEAA EKVAQVKSCH PIMPHRGVSG  360
SESKHKVVQM KTMSASQCSD VAKQKTTPSQ LTVFQESVSK LMFIPTNLLT DSGLANSDSN  420
HPSLCAFTSS GRQCGHGSEC SYLHAENRKE DCPEKYQNST SSRATQGNHS TYHGHSEETT  480
VAIPAIPLTL HMPLPRNSPG ASADGQYKLL AAPIEAVPIS YRPAEPIRQP KRSFCNLGPL  540
PGVMSELTRQ EKGPHPLVHA TALACGARVV PVEEAASLIK AIESKIRSGG AKIARLPSSR  600
LTRLVPEAIS MSSSSEDGEE NDHSEPPAVN VEGYCHDDQI SEEMKLQGEA SELETDFENC  660
SGHENHDTAD C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-28	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.2