PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011440.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 633aa MW: 70428.5 Da PI: 7.4782

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.5	4e-27	39	129	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY+ YA+++GF++r+s+ ++s+++++i++r+ vCskeg++e+++ + ++++++r+ tr+gCka++++kk + gkw+vtk+++ HnH TRIDC4AG011440.10 39 DFYSLYARHAGFRIRISRYTRSRHDNSIISRRIVCSKEGFHETRNCEglhPDQKQQERTGTRVGCKAMIMIKKIDPGKWVVTKFVKTHNHG 129 6*****************************************9999999999**********************************6 PP
2	FAR1	89.5	4.5e-28	177	269	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4AG011440.10 177 FYINYARLNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSL 268 9***************************************99999998899999********************************99 PP FAR1 90 a 90 TRIDC4AG011440.10 269 L 269 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF RIRISRYTRS 60 RHDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KIDPGKWVVT 120 KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS EEAAKLFYIN 180 YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG 240 CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQSTDSLTV LYNQLCQEAI KFAKEGSVTE 300 EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR GVSGSESKHK VVQMKTMSAS QCSDVAKQKT 360 TPSQLTVFQE SVSKLMFIPT NLLTDSGLAN SDSNHPSLCA FTSSGRQCGH GSECSYLHAE 420 NRKEDCPEKY QNSTSSRATQ GNHSTYHGHS EETTVAIPAI PLTLHMPLPR NSPGASADGQ 480 YKLLAAPIEA VPISYRPAEP IRQPKRSFCN LGPLPGVMSE LTRQEKGPHP LVHATALACG 540 ARVVPVEEAA SLIKAIESKI RSGGAKIARL PSSRLTRLVP EAISMSSSSE DGEENDHSEP 600 PAVNVEGYCH DDQISEEMKL QGEASELETD FEN

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF RIRISRYTRS  60
RHDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KIDPGKWVVT  120
KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS EEAAKLFYIN  180
YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG  240
CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQSTDSLTV LYNQLCQEAI KFAKEGSVTE  300
EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR GVSGSESKHK VVQMKTMSAS QCSDVAKQKT  360
TPSQLTVFQE SVSKLMFIPT NLLTDSGLAN SDSNHPSLCA FTSSGRQCGH GSECSYLHAE  420
NRKEDCPEKY QNSTSSRATQ GNHSTYHGHS EETTVAIPAI PLTLHMPLPR NSPGASADGQ  480
YKLLAAPIEA VPISYRPAEP IRQPKRSFCN LGPLPGVMSE LTRQEKGPHP LVHATALACG  540
ARVVPVEEAA SLIKAIESKI RSGGAKIARL PSSRLTRLVP EAISMSSSSE DGEENDHSEP  600
PAVNVEGYCH DDQISEEMKL QGEASELETD FEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	6e-36	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.10