PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011410.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 981aa MW: 112079 Da PI: 6.3607

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011410.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.3	2.6e-18	102	207	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkek.dgk 75 Y++YA ++GF+ ++++ ++ +g +++tf C++ gk++e ek+ r+++ ++tgCka+l ++ ++ +++ TRIDC4AG011410.3 102 LYKAYAFRMGFHAVRRTCHNY--EGIRYRSTFSCTQAGKSREGAAPsedsgaryplrnkrgaatPEKRARRTTAEKTGCKAMLIIRDKRvNDR 192 7*********999998887..7889********99988778999********9877777888899********999* PP FAR1 76 wevtkleleHnHela 90 w+v+ ++leHnH+++ TRIDC4AG011410.3 193 WKVEFVDLEHNHPCT 207 ************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence
SERPPHSRAT RAQNPSCEEE EAAGLVKDEI ADDLNADPAE DEDEDEVVVE EGEDEVLVAS 60 DDDDGAADGA GGDDDFVPRT LEEALVPRVG TVFDSVDEAF SLYKAYAFRM GFHAVRRTCH 120 NYEGIRYRST FSCTQAGKSR EGAAPSEDSG ARYPLRNKRG AATPEKRARR TTAEKTGCKA 180 MLIIRDKRVN DRWKVEFVDL EHNHPCTPDM VRFLKSYREM PESAKKKAKI TVEMDETVEK 240 SLSEIAETRK FPTRPKRSVS GGAAAGGLRF NRTDSFVQRF GDEDLIAVKK FIEMMQEKKP 300 NFIHSWDLDQ ESRMKNFFWT DLRSQAQYRY FGDVISLDVM YLQHSRASLP LATLLGVNNQ 360 GHLVLLGCGL LSKDSKENYV WLLKRWLSCM NGKPPEAITT SYSDVVAEAV SEVLPDARHR 420 FCFWHILKKL QENVGRTHEK EAISLRFKEV VYDTVTLTDF EKEWEAMVEH YKLKDNEWFS 480 ALYSCRKQWA PGYVNHSFWA GTSAIRKVEK PDPYFDGVVT SKTTLPVFLE QYETTLRGKL 540 EREAYDDLRS YYSRLTLLSG LPFEEQLLEL YTVPMFQAFQ DEIKQLMHVI CKEVDRSGNS 600 ITYMVSELIQ GKKVDYTVVY NNSDKDVWCI CRSFPSRGIL CSHALSVLKQ ENVLMLPSKY 660 ILSRWRKDFR IIHASASPNS VALQRDLSIF DDLYVRGHEY LEDVIDIGAR EPELKEFVLS 720 AMKEAKGKLV RPGQTQQGDQ RVDVNMAVTG QVSADRRVDV NMASNTTSII HRDRRVEANM 780 PLNTRALVHE DNMASNTTSL IHGDRRADME MQTPHLIHRE GRVDMNMTAP HLMQRERRVD 840 VNMTSPHLIH GDRRVDMNLG SPHFIHSDRG VDMNLTSPHL IHGDRRVDMN MASPHLIHGD 900 RRVDMNMTSP HDDAMHTFDL VNVNLESSLP MAATDFMQMH PHPPVYHPKQ LLNMRDQVMD 960 SNKRSNVETN TYFIGGGMHV G

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence

SERPPHSRAT RAQNPSCEEE EAAGLVKDEI ADDLNADPAE DEDEDEVVVE EGEDEVLVAS  60
DDDDGAADGA GGDDDFVPRT LEEALVPRVG TVFDSVDEAF SLYKAYAFRM GFHAVRRTCH  120
NYEGIRYRST FSCTQAGKSR EGAAPSEDSG ARYPLRNKRG AATPEKRARR TTAEKTGCKA  180
MLIIRDKRVN DRWKVEFVDL EHNHPCTPDM VRFLKSYREM PESAKKKAKI TVEMDETVEK  240
SLSEIAETRK FPTRPKRSVS GGAAAGGLRF NRTDSFVQRF GDEDLIAVKK FIEMMQEKKP  300
NFIHSWDLDQ ESRMKNFFWT DLRSQAQYRY FGDVISLDVM YLQHSRASLP LATLLGVNNQ  360
GHLVLLGCGL LSKDSKENYV WLLKRWLSCM NGKPPEAITT SYSDVVAEAV SEVLPDARHR  420
FCFWHILKKL QENVGRTHEK EAISLRFKEV VYDTVTLTDF EKEWEAMVEH YKLKDNEWFS  480
ALYSCRKQWA PGYVNHSFWA GTSAIRKVEK PDPYFDGVVT SKTTLPVFLE QYETTLRGKL  540
EREAYDDLRS YYSRLTLLSG LPFEEQLLEL YTVPMFQAFQ DEIKQLMHVI CKEVDRSGNS  600
ITYMVSELIQ GKKVDYTVVY NNSDKDVWCI CRSFPSRGIL CSHALSVLKQ ENVLMLPSKY  660
ILSRWRKDFR IIHASASPNS VALQRDLSIF DDLYVRGHEY LEDVIDIGAR EPELKEFVLS  720
AMKEAKGKLV RPGQTQQGDQ RVDVNMAVTG QVSADRRVDV NMASNTTSII HRDRRVEANM  780
PLNTRALVHE DNMASNTTSL IHGDRRADME MQTPHLIHRE GRVDMNMTAP HLMQRERRVD  840
VNMTSPHLIH GDRRVDMNLG SPHFIHSDRG VDMNLTSPHL IHGDRRVDMN MASPHLIHGD  900
RRVDMNMTSP HDDAMHTFDL VNVNLESSLP MAATDFMQMH PHPPVYHPKQ LLNMRDQVMD  960
SNKRSNVETN TYFIGGGMHV G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	4e-89	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011410.3