PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 1002aa MW: 114429 Da PI: 6.2554

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.2	2.6e-18	106	211	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkek.dgk 75 Y++YA ++GF+ ++++ ++ +g +++tf C++ gk++e ek+ r+++ ++tgCka+l ++ ++ +++ TRIDC4AG011410.1 106 LYKAYAFRMGFHAVRRTCHNY--EGIRYRSTFSCTQAGKSREGAAPsedsgaryplrnkrgaatPEKRARRTTAEKTGCKAMLIIRDKRvNDR 196 7*********999998887..7889********99988778999********9877777888899********999* PP FAR1 76 wevtkleleHnHela 90 w+v+ ++leHnH+++ TRIDC4AG011410.1 197 WKVEFVDLEHNHPCT 211 ************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
MEEGSERPPH SRATRAQNPS CEEEEAAGLV KDEIADDLNA DPAEDEDEDE VVVEEGEDEV 60 LVASDDDDGA ADGAGGDDDF VPRTLEEALV PRVGTVFDSV DEAFSLYKAY AFRMGFHAVR 120 RTCHNYEGIR YRSTFSCTQA GKSREGAAPS EDSGARYPLR NKRGAATPEK RARRTTAEKT 180 GCKAMLIIRD KRVNDRWKVE FVDLEHNHPC TPDMVRFLKS YREMPESAKK KAKITVEMDE 240 TVEKSLSEIA ETRKFPTRPK RSVSGGAAAG GLRFNRTDSF VQRFGDEDLI AVKKFIEMMQ 300 EKKPNFIHSW DLDQESRMKN FFWTDLRSQA QYRYFGDVIS LDVMYLQHSR ASLPLATLLG 360 VNNQGHLVLL GCGLLSKDSK ENYVWLLKRW LSCMNGKPPE AITTSYSDVV AEAVSEVLPD 420 ARHRFCFWHI LKKLQENVGR THEKEAISLR FKEVVYDTVT LTDFEKEWEA MVEHYKLKDN 480 EWFSALYSCR KQWAPGYVNH SFWAGTSAIR KVEKPDPYFD GVVTSKTTLP VFLEQYETTL 540 RGKLEREAYD DLRSYYSRLT LLSGLPFEEQ LLELYTVPMF QAFQDEIKQL MHVICKEVDR 600 SGNSITYMVS ELIQGKKVDY TVVYNNSDKD VWCICRSFPS RGILCSHALS VLKQENVLML 660 PSKYILSRWR KDFRIIHASA SPNSVALQRD LSIFDDLYVR GHEYLEDVID IGAREPELKE 720 FVLSAMKEAK GKLVRPGQTQ QGDQRVDVNM AVTGQVSADR RVDVNMASNT TSIIHRDRRV 780 EANMPLNTRA LVHEDNMASN TTSLIHGDRR ADMEMQTPHL IHREGRVDMN MTAPHLMQRE 840 RRVDVNMTSP HLIHGDRRVD MNLGSPHFIH SDRGVDMNLT SPHLIHGDRR VDMNMASPHL 900 IHGDRRVDMN MTSPHMIHGD TRVDMNMVST SQDDAMHTFD LVNVNLESSL PMAATDFMQM 960 HPHPPVYHPK QLLNMRDQVM DSNKRSNVET NTYFIGGGMH VG

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

MEEGSERPPH SRATRAQNPS CEEEEAAGLV KDEIADDLNA DPAEDEDEDE VVVEEGEDEV  60
LVASDDDDGA ADGAGGDDDF VPRTLEEALV PRVGTVFDSV DEAFSLYKAY AFRMGFHAVR  120
RTCHNYEGIR YRSTFSCTQA GKSREGAAPS EDSGARYPLR NKRGAATPEK RARRTTAEKT  180
GCKAMLIIRD KRVNDRWKVE FVDLEHNHPC TPDMVRFLKS YREMPESAKK KAKITVEMDE  240
TVEKSLSEIA ETRKFPTRPK RSVSGGAAAG GLRFNRTDSF VQRFGDEDLI AVKKFIEMMQ  300
EKKPNFIHSW DLDQESRMKN FFWTDLRSQA QYRYFGDVIS LDVMYLQHSR ASLPLATLLG  360
VNNQGHLVLL GCGLLSKDSK ENYVWLLKRW LSCMNGKPPE AITTSYSDVV AEAVSEVLPD  420
ARHRFCFWHI LKKLQENVGR THEKEAISLR FKEVVYDTVT LTDFEKEWEA MVEHYKLKDN  480
EWFSALYSCR KQWAPGYVNH SFWAGTSAIR KVEKPDPYFD GVVTSKTTLP VFLEQYETTL  540
RGKLEREAYD DLRSYYSRLT LLSGLPFEEQ LLELYTVPMF QAFQDEIKQL MHVICKEVDR  600
SGNSITYMVS ELIQGKKVDY TVVYNNSDKD VWCICRSFPS RGILCSHALS VLKQENVLML  660
PSKYILSRWR KDFRIIHASA SPNSVALQRD LSIFDDLYVR GHEYLEDVID IGAREPELKE  720
FVLSAMKEAK GKLVRPGQTQ QGDQRVDVNM AVTGQVSADR RVDVNMASNT TSIIHRDRRV  780
EANMPLNTRA LVHEDNMASN TTSLIHGDRR ADMEMQTPHL IHREGRVDMN MTAPHLMQRE  840
RRVDVNMTSP HLIHGDRRVD MNLGSPHFIH SDRGVDMNLT SPHLIHGDRR VDMNMASPHL  900
IHGDRRVDMN MTSPHMIHGD TRVDMNMVST SQDDAMHTFD LVNVNLESSL PMAATDFMQM  960
HPHPPVYHPK QLLNMRDQVM DSNKRSNVET NTYFIGGGMH VG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	3e-89	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011410.1