PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG010210.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 460aa MW: 51316.6 Da PI: 10.418

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3.1e-08	84	126	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.8 84 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 126 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
PNSPISKFPQ TVENFVPNRN LLAALPDRHH EKSRDICAAN VMEKEVCEEM SPLSQPVDLP 60 DATAPSASDP SQKPAKKATR QWAAWTRQEE ESFFNALRQV GKNFEKITLR VQSKNKDQVR 120 HYYYRLVRRM KKLLGPGFSL DARNSKDTIA AMLRWWSLLE KFSCSASKLH LKPRRFKTFV 180 DALGNQLLKD RKRTRRKCSL GDTRLSSSSP VLSKTPGNQS FAVGLLPMDA QNGSKGASSK 240 GAFMKRVAEP NSNKSGVIRG DLSATRTVRQ KRRAGGAGAC AAYKKWERAA MAGVSLVADA 300 AEELERKMTT QNLSCNADAT VLASSPNNVS TVDDVGTNHM KEADPQAPSK LKLQLFPINE 360 ATRKALEKDD HNPHLELTLS SKKKMSSVLE HLNRKWGNSN IACGELVLFP YCAHQEDLAT 420 YQRWTTQDTV AVADVFFSVN SPSIFRLRYG VSVLYKIVMF

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

PNSPISKFPQ TVENFVPNRN LLAALPDRHH EKSRDICAAN VMEKEVCEEM SPLSQPVDLP  60
DATAPSASDP SQKPAKKATR QWAAWTRQEE ESFFNALRQV GKNFEKITLR VQSKNKDQVR  120
HYYYRLVRRM KKLLGPGFSL DARNSKDTIA AMLRWWSLLE KFSCSASKLH LKPRRFKTFV  180
DALGNQLLKD RKRTRRKCSL GDTRLSSSSP VLSKTPGNQS FAVGLLPMDA QNGSKGASSK  240
GAFMKRVAEP NSNKSGVIRG DLSATRTVRQ KRRAGGAGAC AAYKKWERAA MAGVSLVADA  300
AEELERKMTT QNLSCNADAT VLASSPNNVS TVDDVGTNHM KEADPQAPSK LKLQLFPINE  360
ATRKALEKDD HNPHLELTLS SKKKMSSVLE HLNRKWGNSN IACGELVLFP YCAHQEDLAT  420
YQRWTTQDTV AVADVFFSVN SPSIFRLRYG VSVLYKIVMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-131	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.8