PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG010210.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 816aa MW: 89916.5 Da PI: 5.182

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.4e-08	105	147	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.6 105 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 147 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 816 aa Download sequence
DPSFSDCSHL SFLNFPQFLQ IPNSPISKFP QTVENFVPNR NLLAALPDRH HEKSRDICAA 60 NVMEKEVCEE MSPLSQPVDL PDATAPSASD PSQKPAKKAT RQWAAWTRQE EESFFNALRQ 120 VGKNFEKITL RVQSKNKDQV RHYYYRLVRR MKKLLGPGFS LDARNSKDTI AAMLRWWSLL 180 EKFSCSASKL HLKPRRFKTF VDALGNQLLK DRKRTRRKCS LGDTRLSSSS PVLSKTPGNQ 240 SFAVGLLPMD AQNGSKGASS KGAFMKRVAE PNSNKSGVIR GDLSATRTVR QKRRAGGAGA 300 CAAYKKWERA AMAGVSLVAD AAEELERKMT TQNLSCNADA TVLASSPNNV STVDADVGTN 360 HMKEADPQAP SKLKLQLFPI NEATRKALEK DDHNPHLELT LSSKKKMSSV LEHLNRKWGN 420 SNIACGELVL FPYCAHQEDL ATYQRWTTQD TVAVADVFFS VNSPSIFRLR YGWFSLAELE 480 AGLSEISLTR FENCMIPEDI QVKSSSEACV QKDGTLPSDF TSEQSSNNSK DQSALLLGTP 540 SSTGKNAAEE PSINTFPSQS GDHNQEQVPA NQAFEVDPQM DCLAISEVDW ADTLTDISVG 600 YLLTEASKAA NLDCEVTSIA KNPLFDENPC SYDSFDAAVA LHASRYQAAE QPAQTSHSTI 660 WGAEETCDEF SFMLATARKQ QGLNTSASSP PDSDNEVHSS NSEGFQGFLQ DLAGGDTLGN 720 PCADDVKAME ELCARSPPQS DNDFGLKDQP LDDAFWPESL GPLDLDIPPI RSLADEFILG 780 DSQNSWSRMM ENSMDAFRNM SFFVSDNNDS VLPPIM

Sequence ? help Back to Top

Protein Sequence Length: 816 aa Download sequence

DPSFSDCSHL SFLNFPQFLQ IPNSPISKFP QTVENFVPNR NLLAALPDRH HEKSRDICAA  60
NVMEKEVCEE MSPLSQPVDL PDATAPSASD PSQKPAKKAT RQWAAWTRQE EESFFNALRQ  120
VGKNFEKITL RVQSKNKDQV RHYYYRLVRR MKKLLGPGFS LDARNSKDTI AAMLRWWSLL  180
EKFSCSASKL HLKPRRFKTF VDALGNQLLK DRKRTRRKCS LGDTRLSSSS PVLSKTPGNQ  240
SFAVGLLPMD AQNGSKGASS KGAFMKRVAE PNSNKSGVIR GDLSATRTVR QKRRAGGAGA  300
CAAYKKWERA AMAGVSLVAD AAEELERKMT TQNLSCNADA TVLASSPNNV STVDADVGTN  360
HMKEADPQAP SKLKLQLFPI NEATRKALEK DDHNPHLELT LSSKKKMSSV LEHLNRKWGN  420
SNIACGELVL FPYCAHQEDL ATYQRWTTQD TVAVADVFFS VNSPSIFRLR YGWFSLAELE  480
AGLSEISLTR FENCMIPEDI QVKSSSEACV QKDGTLPSDF TSEQSSNNSK DQSALLLGTP  540
SSTGKNAAEE PSINTFPSQS GDHNQEQVPA NQAFEVDPQM DCLAISEVDW ADTLTDISVG  600
YLLTEASKAA NLDCEVTSIA KNPLFDENPC SYDSFDAAVA LHASRYQAAE QPAQTSHSTI  660
WGAEETCDEF SFMLATARKQ QGLNTSASSP PDSDNEVHSS NSEGFQGFLQ DLAGGDTLGN  720
PCADDVKAME ELCARSPPQS DNDFGLKDQP LDDAFWPESL GPLDLDIPPI RSLADEFILG  780
DSQNSWSRMM ENSMDAFRNM SFFVSDNNDS VLPPIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-162	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.6