PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG010210.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 419aa MW: 46737.4 Da PI: 10.4444

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.7e-08	43	85	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.1 43 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 85 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MEKEVCEEMS PLSQPVDLPD ATAPSASDPS QKPAKKATRQ WAAWTRQEEE SFFNALRQVG 60 KNFEKITLRV QSKNKDQVRH YYYRLVRRMK KLLGPGFSLD ARNSKDTIAA MLRWWSLLEK 120 FSCSASKLHL KPRRFKTFVD ALGNQLLKDR KRTRRKCSLG DTRLSSSSPV LSKTPGNQSF 180 AVGLLPMDAQ NGSKGASSKG AFMKRVAEPN SNKSGVIRGD LSATRTVRQK RRAGGAGACA 240 AYKKWERAAM AGVSLVADAA EELERKMTTQ NLSCNADATV LASSPNNVST VDDVGTNHMK 300 EADPQAPSKL KLQLFPINEA TRKALEKDDH NPHLELTLSS KKKMSSVLEH LNRKWGNSNI 360 ACGELVLFPY CAHQEDLATY QRWTTQDTVA VADVFFSVNS PSIFRLRYGV SVLYKIVMF

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MEKEVCEEMS PLSQPVDLPD ATAPSASDPS QKPAKKATRQ WAAWTRQEEE SFFNALRQVG  60
KNFEKITLRV QSKNKDQVRH YYYRLVRRMK KLLGPGFSLD ARNSKDTIAA MLRWWSLLEK  120
FSCSASKLHL KPRRFKTFVD ALGNQLLKDR KRTRRKCSLG DTRLSSSSPV LSKTPGNQSF  180
AVGLLPMDAQ NGSKGASSKG AFMKRVAEPN SNKSGVIRGD LSATRTVRQK RRAGGAGACA  240
AYKKWERAAM AGVSLVADAA EELERKMTTQ NLSCNADATV LASSPNNVST VDDVGTNHMK  300
EADPQAPSKL KLQLFPINEA TRKALEKDDH NPHLELTLSS KKKMSSVLEH LNRKWGNSNI  360
ACGELVLFPY CAHQEDLATY QRWTTQDTVA VADVFFSVNS PSIFRLRYGV SVLYKIVMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-132	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.1