PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG009400.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 350aa MW: 38345.9 Da PI: 6.2444

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG009400.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.7	4.2e-08	142	220	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC.............................TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas..........................kapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ + f L +++P + ++ +K++ L +++Y+k+L+ TRIDC4AG009400.1 142 QEHVIAERKRREKLQQQFVSLATIVPGLRkvrdketwlhsrghhtncprraplvtLRHCFQTDKISLLGSTIDYVKQLE 220 5799*********************777********************8778888**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEQPNQWLTQ TEQEELAYMY QQEGVPVPGM EQQFAEPPLP GHQEQYYTPP MATPSFHPSR 60 SSDFPSFGGS SSLPNLPFGS TTVKNELGQP SPPPPSSNFL SFGAGQAGTL NFSGGAWQHD 120 GVEGTMQLQA PERRSRAPAN AQEHVIAERK RREKLQQQFV SLATIVPGLR KVRDKETWLH 180 SRGHHTNCPR RAPLVTLRHC FQTDKISLLG STIDYVKQLE DKVRALEEQG SRRSSESTTV 240 FESKCRISAA DNDAAGPSGS GDAAEDSSPA VEASIRGHTA LLKICCKERR GVLVMVLSEL 300 ENQGLSIINT NVVPFTDSCL NITITVQIEE GFSSAAELVR NLTVALRSFS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEQPNQWLTQ TEQEELAYMY QQEGVPVPGM EQQFAEPPLP GHQEQYYTPP MATPSFHPSR  60
SSDFPSFGGS SSLPNLPFGS TTVKNELGQP SPPPPSSNFL SFGAGQAGTL NFSGGAWQHD  120
GVEGTMQLQA PERRSRAPAN AQEHVIAERK RREKLQQQFV SLATIVPGLR KVRDKETWLH  180
SRGHHTNCPR RAPLVTLRHC FQTDKISLLG STIDYVKQLE DKVRALEEQG SRRSSESTTV  240
FESKCRISAA DNDAAGPSGS GDAAEDSSPA VEASIRGHTA LLKICCKERR GVLVMVLSEL  300
ENQGLSIINT NVVPFTDSCL NITITVQIEE GFSSAAELVR NLTVALRSFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	153	ERKRRE
2	149	154	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	6e-27	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG009400.1