PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 311aa    MW: 33858.9 Da    PI: 6.0486
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.3e-12135183355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4AG009210.18 135 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 183
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MYSPPCSAAG SNGERSFAAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGS  60
GTELSRNMSM EKGLKGGKRK GSGEGSSTMH SQQEETGGMS QREVSMERAG EKEGDAASNR  120
EDYVHIRAKR GQATNNHSLA ERFRREKINE RMKHLQDLVP GCNKITGKAM MLDEIINYVQ  180
SLQRQVEFLS MKLSAVSPEL NCDLDLQDIL CPQDARSAFP GYGQRLGSVH PNSNMYRASQ  240
PGLSRPELYG NGIIIPNPAN VHMARAAQQL SAFPQRSIVW DEELGNVGPA AFPSDVVGAS  300
SLENSESMKV E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-44bHLH family protein