PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 294aa    MW: 32920.4 Da    PI: 9.48
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.63.9e-12132180355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4AG009210.17 132 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 180
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
VFPSLLCCWK QRRAELRGRS QPACFARPCH GFRRARPFSY AQCRDARWSS VLQSYCGSGT  60
ELSRNMSMEK GLKGGKRKGS GEGSSTMHSQ EETGGMSQRE VSMERAGEKE GDAASNREDY  120
VHIRAKRGQA TNNHSLAERF RREKINERMK HLQDLVPGCN KITGKAMMLD EIINYVQSLQ  180
RQVEFLSMKL SAVSPELNCD LDLQDILCPQ DARSAFPGYG QRLGSVHPNS NMYRASQPGL  240
SRPELYGNGI IIPNPANVHM ARAAQQLSAF PQVCLHPTPS IKTSYSLQCR LHTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-44bHLH family protein