PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 288aa    MW: 31994.2 Da    PI: 8.2307
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.2e-13166215355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +   ++k   Ka++L + ++Y++sLq
  TRIDC4AG009210.15 166 NNHSLAERFRREKINERMKHLQDLVPGC---NKKITGKAMMLDEIINYVQSLQ 215
                        58**************************...8888*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MALFVPCINV FVGCCWQHGR DHVSDHCFSW QMYSPPCSAA GSNGERSFAA GANPLALLDH  60
AMDFDEHVLF PMHNAGMQDG VQFYNPTAGG SGTELSRNMS MEKGLKGGKR KGSGEGSSTM  120
HSQQEETGGM SQREVSMERA GEKEGDAASN REDYVHIRAK RGQATNNHSL AERFRREKIN  180
ERMKHLQDLV PGCNKKITGK AMMLDEIINY VQSLQRQVEV STPKQIPQRS LTLGQQWLKL  240
LVLPVLVSAV PLDEALGGQP RAELRSRPPR RKTNGDSEQQ RTHICLYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.12e-33bHLH family protein