PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009200.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 280aa    MW: 30389.9 Da    PI: 7.1807
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-153990155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  TRIDC4AG009200.1 39 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFTTQEEAAEAYDVAAIKFRG 90
                      57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
PISRLENYRE EVEEMKSMTR QEFVAHLRRR SSGFSRGASI YRGVTRHHQH GRWQARIGRV  60
AGNKDLYLGT FTTQEEAAEA YDVAAIKFRG LNAVTNFDIT RYDVDKIMES SSLLPGDEAR  120
KVKAVEAANH VPAMHNGGGE ISHAEEGSSG VWRMVLHGTP QQAAQCTPEV ADLQKGFMGG  180
GDPRSSLHGI AGFDVESAAH DIDVSGKINY SNPSSLVTSL SNSREGSPER FSLPSLYAKH  240
PNAVSVASMS PWMAMPAPAA AHVLRGPNSS MPVFAAWTDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.12e-57AP2 family protein