PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG008600.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 518aa MW: 57560.2 Da PI: 4.5147

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008600.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	23.9	1.2e-07	12	59	79	128
NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ W++ g +++++ +g l g+k+t+++y+ ++++++tdW +h+y + TRIDC4AG008600.6 12 KDISWQKNGPSRSIIL-DGGLRGCKETFALYT-FKNSPRRTDWELHQYYI 59 4557**********.999*******5.666778*******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
KKINLDNNEN DKDISWQKNG PSRSIILDGG LRGCKETFAL YTFKNSPRRT DWELHQYYIK 60 NTMENEGELV LSKVFYKSQK SHCECAAKAS VQSAQDNSVT DDDSREEKED AQLEKLSVNM 120 ATESNFVEGN GNNQEQMLVE MYPDQDKPCS LKHVLDTADV NHENQINDQA ETELDHMSLQ 180 DRYRILLADM RSCSARVSAE KCALNDMGNS SMQMDAETSG PVPKSESEEI NHEGTAYREC 240 SVNGKEIPVE DTEGPVNDKA FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL 300 DGYAIYPSES PVKFQHSNND GLKVSGSILE CVPKDAEDSL PSLGVKSELS GYELPGLCEN 360 SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ RKKRDSSEKV LEEDGYKNDE GIPYPSRQKR 420 KKKTATDSIE TALEEDAPGL LQILLDKGIV VKEIKLYDVV EDDEMLPDCT ESDFQDLENV 480 ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC LISLIEQV

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

KKINLDNNEN DKDISWQKNG PSRSIILDGG LRGCKETFAL YTFKNSPRRT DWELHQYYIK  60
NTMENEGELV LSKVFYKSQK SHCECAAKAS VQSAQDNSVT DDDSREEKED AQLEKLSVNM  120
ATESNFVEGN GNNQEQMLVE MYPDQDKPCS LKHVLDTADV NHENQINDQA ETELDHMSLQ  180
DRYRILLADM RSCSARVSAE KCALNDMGNS SMQMDAETSG PVPKSESEEI NHEGTAYREC  240
SVNGKEIPVE DTEGPVNDKA FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL  300
DGYAIYPSES PVKFQHSNND GLKVSGSILE CVPKDAEDSL PSLGVKSELS GYELPGLCEN  360
SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ RKKRDSSEKV LEEDGYKNDE GIPYPSRQKR  420
KKKTATDSIE TALEEDAPGL LQILLDKGIV VKEIKLYDVV EDDEMLPDCT ESDFQDLENV  480
ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC LISLIEQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	391	421	RKKRDSSEKVLEEDGYKNDEGIPYPSRQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-14	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008600.6