PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG008600.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 465aa MW: 51871.4 Da PI: 4.6483

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008600.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	31.4	5.5e-10	4	72	53	128
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +yfF+k+ + ++++ + + W++ g +++++ +g l g+k+t+++y+ ++++++tdW +h+y + TRIDC4AG008600.5 4 QDGHALYFFHKKINLDNNEND--K---DISWQKNGPSRSIIL-DGGLRGCKETFALYT-FKNSPRRTDWELHQYYI 72 455678***9987755333..3...335********.999*******5.666778*******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
GMRQDGHALY FFHKKINLDN NENDKDISWQ KNGPSRSIIL DGGLRGCKET FALYTFKNSP 60 RRTDWELHQY YIKNTMENEG ELVLSKVFYK SQKSHCECAA KASVQSAQDN SVTDDDSREE 120 KEDAQLEKLS VNMATESNFV EGNGNNQEQM LVEMYPDQDK PCSLKHVLDT ADVNHENQIN 180 DQAETELDHM SLQDRYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE TSGPVPKSES 240 EEINHEGTAY RECSVNGKEI PVEDTEGPVN DKAFNSSAEL LLSQTPACGD ENVQLAPRNS 300 GTYLVDVKTE PALDGYAIYP SESPVKFQHS NNDGLKVSGS ILECVPKDAE DSLPSLGVKS 360 ELSGYELPGL CENSFISSME PIVKKPHTRT LNCNGGLAPC SRQRKKRDSS EKVLEEDGYK 420 NDEGIPYPSR QKRKKKTATD SIETALEEDA PGLLQVPFRY IHNSI

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

GMRQDGHALY FFHKKINLDN NENDKDISWQ KNGPSRSIIL DGGLRGCKET FALYTFKNSP  60
RRTDWELHQY YIKNTMENEG ELVLSKVFYK SQKSHCECAA KASVQSAQDN SVTDDDSREE  120
KEDAQLEKLS VNMATESNFV EGNGNNQEQM LVEMYPDQDK PCSLKHVLDT ADVNHENQIN  180
DQAETELDHM SLQDRYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE TSGPVPKSES  240
EEINHEGTAY RECSVNGKEI PVEDTEGPVN DKAFNSSAEL LLSQTPACGD ENVQLAPRNS  300
GTYLVDVKTE PALDGYAIYP SESPVKFQHS NNDGLKVSGS ILECVPKDAE DSLPSLGVKS  360
ELSGYELPGL CENSFISSME PIVKKPHTRT LNCNGGLAPC SRQRKKRDSS EKVLEEDGYK  420
NDEGIPYPSR QKRKKKTATD SIETALEEDA PGLLQVPFRY IHNSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	404	434	RKKRDSSEKVLEEDGYKNDEGIPYPSRQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	6e-16	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008600.5