PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG008110.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 194aa    MW: 21529.9 Da    PI: 10.2454
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG008110.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY51.63.7e-162572146
             YABBY  1 advfssseqvCyvqCnfCntila..vsvPstslfkvvtvrCGhCtsll 46
                      +d++s se++Cyv+C++Cnt+la  v vP + l+ +vtv+CGhC +l 
  TRIDC4AG008110.3 25 MDLVSPSEHLCYVRCTYCNTVLAlqVGVPCKRLMDTVTVKCGHCNNLS 72
                      578999***************9744778*****************984 PP
2YABBY30.21.4e-09114146102134
             YABBY 102 senedeevprvppvirPPekrqrvPsaynrfik 134
                       s  +++ +pr+p v++PPek+ r Psaynrf++
  TRIDC4AG008110.3 114 SPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMR 146
                       45566788999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
LRPTDAGHPP PERPVVRWLA SMQSMDLVSP SEHLCYVRCT YCNTVLALQV GVPCKRLMDT  60
VTVKCGHCNN LSFLSPRPPP MVQPLSPNDH HHPMGPFQGC TDCRRNQPLP PLASPTSSDA  120
SPRAPFVVKP PEKKHRLPSA YNRFMRGRKY NVSKLQSQTS LTEKPSAWLL RTGRSATLAA  180
HRLSLLPTAP QSPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.18e-30YABBY family protein