PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG007410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 394aa MW: 45978.4 Da PI: 6.8447

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG007410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.3	9.6e-22	70	150	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA +vGFs+rk+++k++ ++g+i++++ vCs++g+re+e++k +tr++C+a+++ + +++g w+v+k++++HnH la TRIDC4AG007410.1 70 DMYNTYAGKVGFSIRKNQTKRR-HDGTIYQKRIVCSNQGHRETESSK--------DTTRMDCNARIQFSVSREGIWMVQKVVTDHNHYLA 150 58************998776.9999**********998877........99****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
DNSRCSKLYR PSYTMSEATT CTMDLPPPQV MSGGGQQDDA VTDGRGENEE QTIQVPEVGK 60 TFESEKDAYD MYNTYAGKVG FSIRKNQTKR RHDGTIYQKR IVCSNQGHRE TESSKDTTRM 120 DCNARIQFSV SREGIWMVQK VVTDHNHYLA SPNKVHKLRS QRRVIEADRH LIGQIREAGM 180 KPSQVYDFMV AFYGGPDKVP FAKMDCNNEI GRERKKYLES NDSQTLLEYL KNKQREDPTF 240 FYAIQVDEKD GRIANFFWAD GQSEYKFHKK WHELLDRYNL QDNEWMAKLY ELREKWAAVY 300 RDSFTADMNS TQRSEECEKV SHSLRENELD ADFSSCRKNP ITYSSKLPLL KTASESYTRR 360 MYSEFEEEFT GQFSMSCRLL QTEGSVLTYM VTHM

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

DNSRCSKLYR PSYTMSEATT CTMDLPPPQV MSGGGQQDDA VTDGRGENEE QTIQVPEVGK  60
TFESEKDAYD MYNTYAGKVG FSIRKNQTKR RHDGTIYQKR IVCSNQGHRE TESSKDTTRM  120
DCNARIQFSV SREGIWMVQK VVTDHNHYLA SPNKVHKLRS QRRVIEADRH LIGQIREAGM  180
KPSQVYDFMV AFYGGPDKVP FAKMDCNNEI GRERKKYLES NDSQTLLEYL KNKQREDPTF  240
FYAIQVDEKD GRIANFFWAD GQSEYKFHKK WHELLDRYNL QDNEWMAKLY ELREKWAAVY  300
RDSFTADMNS TQRSEECEKV SHSLRENELD ADFSSCRKNP ITYSSKLPLL KTASESYTRR  360
MYSEFEEEFT GQFSMSCRLL QTEGSVLTYM VTHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-38	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG007410.1