PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG006570.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 170aa    MW: 18474.8 Da    PI: 10.0368
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG006570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-11951351055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+YIk +q
  TRIDC4AG006570.1  95 RKRREKINERLKVLQNLIPNG-----TKVDISTMLEEAVHYIKFMQ 135
                       9******************97.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MQVQRKGKSS AQPKKASKGS CSRGAQEESN GEATNNVQSS SNYLSDEEGS LEMTSCSNMS  60
SASKKTSSSR GDHGGGAKAR AGRGAATDPQ SLYARKRREK INERLKVLQN LIPNGTKVDI  120
STMLEEAVHY IKFMQLQIKL LSSDDMWMFA PIAYNGFNVG LDLKIAPPQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195100RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-47bHLH family protein