PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG005360.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 536aa    MW: 59476.7 Da    PI: 6.0503
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG005360.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS410.71.4e-1251655361374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++++++c +av++++ +  + l+++l++++s +g+p+qRl ay++e+L ar +++++ lyk+l+++e ++ + se +++++l+++++P+++f
  TRIDC4AG005360.3 165 LKQVIVACGKAVDENNCH-EDLLISELQKMVSVSGEPIQRLGAYMLEGLVARRYSTGHALYKSLKCKEPQP-TNSELMSYMHLLYDICPFFRF 255
                       578999******996655.58899********************************************986.567888999************ PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav+ge+ +HiiDf+i qG QW++++qaLa+R +gpp lRiTg+++++s   +   l  +g+rL ++A+++ +pfefn+ v  
  TRIDC4AG005360.3 256 GYMSANGAIAEAVKGENFIHIIDFQIAQGSQWVTMIQALAARVSGPPYLRITGIDDSDSAyaRGGGLDIVGRRLCNIAQSCCLPFEFNA-VNA 347
                       ********************************************************988899999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       + ++++le+L++++gEa+aVn+++qlh+++desv++e++rd++L++vkslsP+vv++veqea++n+++F+ r +e+l+yy+a+f+++++  pr
  TRIDC4AG005360.3 348 ASHEVTLEHLDIRKGEAIAVNFAYQLHHTPDESVCIENHRDRILRMVKSLSPRVVTLVEQEANTNTAPFFSRYMETLDYYTAMFEAIDVACPR 440
                       99******************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +++ r++ E+++++r+ivn++acegaer+erhe ++kWr+r+ +aGF+p+pls  +++++++ll+ ++s  y++ee++g ++lgWk+r+Lv+ 
  TRIDC4AG005360.3 441 DDKVRMSTEQHCVARDIVNLIACEGAERVERHEPFGKWRSRFAMAGFRPYPLSALVNNTIRTLLNDYNSY-YKLEEKDGVIYLGWKNRKLVVS 532
                       ********************************************************************66.********************** PP

              GRAS 371 SaWr 374
                       SaW+
  TRIDC4AG005360.3 533 SAWQ 536
                       ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    
MSAKASNMSY RYPDNSQIPY YSSSMHVGGN GTCYVQQNHE DHHYVSSDGG SQNSDSKSQV  60
IHPQYSTLES SSANCVYAAN SSTSPQCISG SHISLHDSHS DHTYDSPASG ITEVPGLGFT  120
TLQELADALF GSDSDAVSSD RSLVIGAAMH QSNWRELLGI SSGDLKQVIV ACGKAVDENN  180
CHEDLLISEL QKMVSVSGEP IQRLGAYMLE GLVARRYSTG HALYKSLKCK EPQPTNSELM  240
SYMHLLYDIC PFFRFGYMSA NGAIAEAVKG ENFIHIIDFQ IAQGSQWVTM IQALAARVSG  300
PPYLRITGID DSDSAYARGG GLDIVGRRLC NIAQSCCLPF EFNAVNAASH EVTLEHLDIR  360
KGEAIAVNFA YQLHHTPDES VCIENHRDRI LRMVKSLSPR VVTLVEQEAN TNTAPFFSRY  420
METLDYYTAM FEAIDVACPR DDKVRMSTEQ HCVARDIVNL IACEGAERVE RHEPFGKWRS  480
RFAMAGFRPY PLSALVNNTI RTLLNDYNSY YKLEEKDGVI YLGWKNRKLV VSSAWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein