PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG004960.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 304aa    MW: 33799.9 Da    PI: 5.7093
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG004960.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.12.5e-2743129371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4AG004960.3  43 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 129
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
DGTAFLRLNN LDINGDDAPS SQAPISIKKK KRRAAAVGPD KGGRGLRQFS MKVCEKVESK  60
GRTTYNEVAD ELVAEFTDPN NNIEPPDPDN PNAQQYDEKN IRRRVYDALN VLMAMDIISK  120
DKKEIQWKGL PRTSINDIEE LQADLAGVKA RIEKKSAYLQ ELQDQYLGMQ NLINRNEQLY  180
GSGNIPSGGV ALPFILIQTR PHATVEVEIS EDMQLVHFDF NTTPFELHDD SYVLKALNSY  240
GKEENAGTSE PISNGCEGSS TPNIYRHQIQ QSAMASNGTN RLPSSPPPPV PGILKGRVKH  300
EHLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12833KKKKRR
22934KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-119E2F/DP family protein