PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG003800.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 333aa    MW: 38647.6 Da    PI: 4.6943
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG003800.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.63.6e-32381282101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+++++ d++++ ++sw + g+sfvv+d++ fa  +Lp++Fkhsnf+SFvRQLn+YgF+k++ ++         weF+++ F +g+++ll
  TRIDC4AG003800.6  38 FLTKTFDLVADPATDGVVSWGRAGDSFVVWDPHLFAAVLLPRFFKHSNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFIRGQRQLL 121
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       + ikr++
  TRIDC4AG003800.6 122 KMIKRRR 128
                       *****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
VKEEWPPPPP EEEEEELEHR GLAPRPMEGL HETGPPPFLT KTFDLVADPA TDGVVSWGRA  60
GDSFVVWDPH LFAAVLLPRF FKHSNFSSFV RQLNTYGFRK IDPDRWEFAN EGFIRGQRQL  120
LKMIKRRRPM SYLPSSQQQA LGSCLEVGQF GFDEEIEVLK RDKNALLAEV VKLRQEQQSS  180
RADMRAMEER LHHVEQKQLQ MMGFLARAIQ NPDFFLQLIQ QQNKLKDLED GYPTKRRRPI  240
DVMPFLGPEG TSQSEPLEST FIFEDREFSE LENLAMNIQG IRKGMEDDRG GRNQGCGEAE  300
LTDDFWEELL SEGMRDEAEM LELERRRSRC FDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121127LKMIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.15e-97HSF family protein