PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG001760.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 266aa    MW: 29065.4 Da    PI: 9.4061
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG001760.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.21.3e-33159215158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4AG001760.7 159 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 215
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
ICRSDSWAHS AALELRARAE AHEMRRKQNM QENGTIMIQF GQQVPNCESS ASDSPQEVSG  60
MSEGSFNEQN DQSGNRDGYT KSSDEGKMMS ALSLGNSEMA YTPPKPDRTH PFAISYPYAD  120
PYYGGAVAAY GAHAIMHPQM VGMVPSSRVP LPIEPAAAEE PIYVNAKQYH AILRRRQLRA  180
KLEAENKLVK SRKPYLHESR HQHAMKRARG TGGRFLNAKE KSEASGGGNA SARSGHAGVP  240
PDGGMFSKHD HTLPSGDFHY RARGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.15e-31NF-YA family protein