PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG001760.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 243aa MW: 26503.6 Da PI: 9.7031 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 107.4 | 1.1e-33 | 136 | 192 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rakle+e+kl ksrkpylheSRh+hA++R+Rg+gGrF TRIDC4AG001760.1 136 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 192 69****************************.**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MRRKQNMQEN GTIMIQFGQQ VPNCESSASD SPQEVSGMSE GSFNEQNDQS GNRDGYTKSS 60 DEGKMMSALS LGNSEMAYTP PKPDRTHPFA ISYPYADPYY GGAVAAYGAH AIMHPQMVGM 120 VPSSRVPLPI EPAAAEEPIY VNAKQYHAIL RRRQLRAKLE AENKLVKSRK PYLHESRHQH 180 AMKRARGTGG RFLNAKEKSE ASGGGNASAR SGHAGVPPDG GMFSKHDHTL PSGDFHYRAR 240 GGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G54160.1 | 2e-31 | NF-YA family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG001760.1 |