PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG001730.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 727aa MW: 83451.3 Da PI: 6.7459

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.8	3.7e-18	114	199	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.9 114 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 199 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
EFQQFLTDCP APSQPLSHRH ATASSSPFPG GSSPAELVTS QAVAAAAAPR YLMEPDLTLD 60 EVAEQNRSAP DEEDEDAFVV EEIGDSSDDR QAEPTVALEP KKGMMFSSED DAVRFYKAYA 120 RKKGFGVIRR TTRHGEDKML TYFTLACNRQ GKAQYSAKNS FKPNPSTRMQ CPAKSNFSRR 180 GENFCITTVT LDHNHPISPS KARFLRCHKK VDLHSKRRLE LNDQAGARMN KNFGSPVMEA 240 GWYGNLEFGE KECTNYLQEK RSLKLGAGDA HALYQYFLHM QSKDPAFFHV MDVAEDGRLR 300 NVFWADARSR AAYESYWDVI TFDTTYLTNK YTIPLATFVG INHHGESVLL GCGLLSNEDT 360 ETFVWLFKSW LCCMSCKPPN AIITDQCKPM QNAIEEVFPQ ARHRWCACHI MKKIPENLNG 420 YENIKSTLSN VVYDSLTKHG FDKAWAEMIN KYDLQENEWL AGLYDNKNRW VPAYVKDTFW 480 AGMSSTKRSE SVNAFFDGYV NARTTLKQFV EQYENLLRDK VEKENKADSK SFQQQIPCIT 540 HYDFERQFQA AYTTAKFKEF QDQLRGKIYC YPTQLNKEGS IFTFGVREDS KIFCEGEDGK 600 GKEKRVILEF IVLFNQGECD VQCMCRLFEF RGILCSHIIS VLALMEITDV PSRYILQRWR 660 KDIKRKHTFI RCSYDDMIDT QVVQRYDNLC KRSHELAENG AESDALHDLV MDGLNELQSK 720 IDAYCAR

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

EFQQFLTDCP APSQPLSHRH ATASSSPFPG GSSPAELVTS QAVAAAAAPR YLMEPDLTLD  60
EVAEQNRSAP DEEDEDAFVV EEIGDSSDDR QAEPTVALEP KKGMMFSSED DAVRFYKAYA  120
RKKGFGVIRR TTRHGEDKML TYFTLACNRQ GKAQYSAKNS FKPNPSTRMQ CPAKSNFSRR  180
GENFCITTVT LDHNHPISPS KARFLRCHKK VDLHSKRRLE LNDQAGARMN KNFGSPVMEA  240
GWYGNLEFGE KECTNYLQEK RSLKLGAGDA HALYQYFLHM QSKDPAFFHV MDVAEDGRLR  300
NVFWADARSR AAYESYWDVI TFDTTYLTNK YTIPLATFVG INHHGESVLL GCGLLSNEDT  360
ETFVWLFKSW LCCMSCKPPN AIITDQCKPM QNAIEEVFPQ ARHRWCACHI MKKIPENLNG  420
YENIKSTLSN VVYDSLTKHG FDKAWAEMIN KYDLQENEWL AGLYDNKNRW VPAYVKDTFW  480
AGMSSTKRSE SVNAFFDGYV NARTTLKQFV EQYENLLRDK VEKENKADSK SFQQQIPCIT  540
HYDFERQFQA AYTTAKFKEF QDQLRGKIYC YPTQLNKEGS IFTFGVREDS KIFCEGEDGK  600
GKEKRVILEF IVLFNQGECD VQCMCRLFEF RGILCSHIIS VLALMEITDV PSRYILQRWR  660
KDIKRKHTFI RCSYDDMIDT QVVQRYDNLC KRSHELAENG AESDALHDLV MDGLNELQSK  720
IDAYCAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-130	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.9