PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG001730.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 678aa MW: 78522.9 Da PI: 6.7724

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.9	3.4e-18	65	150	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.6 65 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 150 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MYLMEPDLTL DEVAEQNRSA PDEEDEDAFV VEEIGDSSDD RQAEPTVALE PKKGMMFSSE 60 DDAVRFYKAY ARKKGFGVIR RTTRHGEDKM LTYFTLACNR QGKAQYSAKN SFKPNPSTRM 120 QCPAKSNFSR RGENFCITTV TLDHNHPISP SKARFLRCHK KVDLHSKRRL ELNDQAGARM 180 NKNFGSPVME AGWYGNLEFG EKECTNYLQE KRSLKLGAGD AHALYQYFLH MQSKDPAFFH 240 VMDVAEDGRL RNVFWADARS RAAYESYWDV ITFDTTYLTN KYTIPLATFV GINHHGESVL 300 LGCGLLSNED TETFVWLFKS WLCCMSCKPP NAIITDQCKP MQNAIEEVFP QARHRWCACH 360 IMKKIPENLN GYENIKSTLS NVVYDSLTKH GFDKAWAEMI NKYDLQENEW LAGLYDNKNR 420 WVPAYVKDTF WAGMSSTKRS ESVNAFFDGY VNARTTLKQF VEQYENLLRD KVEKENKADS 480 KSFQQQIPCI THYDFERQFQ AAYTTAKFKE FQDQLRGKIY CYPTQLNKEG SIFTFGVRED 540 SKIFCEGEDG KGKEKRVILE FIVLFNQGEC DVQCMCRLFE FRGILCSHII SVLALMEITD 600 VPSRYILQRW RKDIKRKHTF IRCSYDDMID TQVVQRYDNL CKRSHELAEN GAESDALHDL 660 VMDGLNELQS KIDAYCAR

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MYLMEPDLTL DEVAEQNRSA PDEEDEDAFV VEEIGDSSDD RQAEPTVALE PKKGMMFSSE  60
DDAVRFYKAY ARKKGFGVIR RTTRHGEDKM LTYFTLACNR QGKAQYSAKN SFKPNPSTRM  120
QCPAKSNFSR RGENFCITTV TLDHNHPISP SKARFLRCHK KVDLHSKRRL ELNDQAGARM  180
NKNFGSPVME AGWYGNLEFG EKECTNYLQE KRSLKLGAGD AHALYQYFLH MQSKDPAFFH  240
VMDVAEDGRL RNVFWADARS RAAYESYWDV ITFDTTYLTN KYTIPLATFV GINHHGESVL  300
LGCGLLSNED TETFVWLFKS WLCCMSCKPP NAIITDQCKP MQNAIEEVFP QARHRWCACH  360
IMKKIPENLN GYENIKSTLS NVVYDSLTKH GFDKAWAEMI NKYDLQENEW LAGLYDNKNR  420
WVPAYVKDTF WAGMSSTKRS ESVNAFFDGY VNARTTLKQF VEQYENLLRD KVEKENKADS  480
KSFQQQIPCI THYDFERQFQ AAYTTAKFKE FQDQLRGKIY CYPTQLNKEG SIFTFGVRED  540
SKIFCEGEDG KGKEKRVILE FIVLFNQGEC DVQCMCRLFE FRGILCSHII SVLALMEITD  600
VPSRYILQRW RKDIKRKHTF IRCSYDDMID TQVVQRYDNL CKRSHELAEN GAESDALHDL  660
VMDGLNELQS KIDAYCAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-131	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.6