PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG001730.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 675aa MW: 78115.4 Da PI: 6.7724

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.9	3.3e-18	62	147	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.4 62 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 147 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MEPDLTLDEV AEQNRSAPDE EDEDAFVVEE IGDSSDDRQA EPTVALEPKK GMMFSSEDDA 60 VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQYSAKNSFK PNPSTRMQCP 120 AKSNFSRRGE NFCITTVTLD HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNKN 180 FGSPVMEAGW YGNLEFGEKE CTNYLQEKRS LKLGAGDAHA LYQYFLHMQS KDPAFFHVMD 240 VAEDGRLRNV FWADARSRAA YESYWDVITF DTTYLTNKYT IPLATFVGIN HHGESVLLGC 300 GLLSNEDTET FVWLFKSWLC CMSCKPPNAI ITDQCKPMQN AIEEVFPQAR HRWCACHIMK 360 KIPENLNGYE NIKSTLSNVV YDSLTKHGFD KAWAEMINKY DLQENEWLAG LYDNKNRWVP 420 AYVKDTFWAG MSSTKRSESV NAFFDGYVNA RTTLKQFVEQ YENLLRDKVE KENKADSKSF 480 QQQIPCITHY DFERQFQAAY TTAKFKEFQD QLRGKIYCYP TQLNKEGSIF TFGVREDSKI 540 FCEGEDGKGK EKRVILEFIV LFNQGECDVQ CMCRLFEFRG ILCSHIISVL ALMEITDVPS 600 RYILQRWRKD IKRKHTFIRC SYDDMIDTQV VQRYDNLCKR SHELAENGAE SDALHDLVMD 660 GLNELQSKID AYCAR

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MEPDLTLDEV AEQNRSAPDE EDEDAFVVEE IGDSSDDRQA EPTVALEPKK GMMFSSEDDA  60
VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQYSAKNSFK PNPSTRMQCP  120
AKSNFSRRGE NFCITTVTLD HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNKN  180
FGSPVMEAGW YGNLEFGEKE CTNYLQEKRS LKLGAGDAHA LYQYFLHMQS KDPAFFHVMD  240
VAEDGRLRNV FWADARSRAA YESYWDVITF DTTYLTNKYT IPLATFVGIN HHGESVLLGC  300
GLLSNEDTET FVWLFKSWLC CMSCKPPNAI ITDQCKPMQN AIEEVFPQAR HRWCACHIMK  360
KIPENLNGYE NIKSTLSNVV YDSLTKHGFD KAWAEMINKY DLQENEWLAG LYDNKNRWVP  420
AYVKDTFWAG MSSTKRSESV NAFFDGYVNA RTTLKQFVEQ YENLLRDKVE KENKADSKSF  480
QQQIPCITHY DFERQFQAAY TTAKFKEFQD QLRGKIYCYP TQLNKEGSIF TFGVREDSKI  540
FCEGEDGKGK EKRVILEFIV LFNQGECDVQ CMCRLFEFRG ILCSHIISVL ALMEITDVPS  600
RYILQRWRKD IKRKHTFIRC SYDDMIDTQV VQRYDNLCKR SHELAENGAE SDALHDLVMD  660
GLNELQSKID AYCAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-131	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.4