PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG001730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 675aa MW: 78115.4 Da PI: 6.7724 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57.9 | 3.3e-18 | 62 | 147 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.1 62 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 147 5**************9998887.7888****************9999...999*****************9.9**************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 675 aa Download sequence |
MEPDLTLDEV AEQNRSAPDE EDEDAFVVEE IGDSSDDRQA EPTVALEPKK GMMFSSEDDA 60 VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQYSAKNSFK PNPSTRMQCP 120 AKSNFSRRGE NFCITTVTLD HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNKN 180 FGSPVMEAGW YGNLEFGEKE CTNYLQEKRS LKLGAGDAHA LYQYFLHMQS KDPAFFHVMD 240 VAEDGRLRNV FWADARSRAA YESYWDVITF DTTYLTNKYT IPLATFVGIN HHGESVLLGC 300 GLLSNEDTET FVWLFKSWLC CMSCKPPNAI ITDQCKPMQN AIEEVFPQAR HRWCACHIMK 360 KIPENLNGYE NIKSTLSNVV YDSLTKHGFD KAWAEMINKY DLQENEWLAG LYDNKNRWVP 420 AYVKDTFWAG MSSTKRSESV NAFFDGYVNA RTTLKQFVEQ YENLLRDKVE KENKADSKSF 480 QQQIPCITHY DFERQFQAAY TTAKFKEFQD QLRGKIYCYP TQLNKEGSIF TFGVREDSKI 540 FCEGEDGKGK EKRVILEFIV LFNQGECDVQ CMCRLFEFRG ILCSHIISVL ALMEITDVPS 600 RYILQRWRKD IKRKHTFIRC SYDDMIDTQV VQRYDNLCKR SHELAENGAE SDALHDLVMD 660 GLNELQSKID AYCAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 1e-131 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG001730.1 |