PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG000390.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 75aa MW: 8631.16 Da PI: 11.4374 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.5 | 1.1e-25 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 rien rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++ TRIDC4AG000390.5 10 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFP 58 8*********************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence |
GRRERIAIRR IENLAARQVT FSKRRRGLFK KAEELSILCD AEVGLAVFSA TGKLFQFPVF 60 GCTFNLTRFL FYLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-19 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG000390.5 |