PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000390.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 75aa    MW: 8631.16 Da    PI: 11.4374
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000390.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.51.1e-251058250
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      rien   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++
  TRIDC4AG000390.5 10 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFP 58
                      8*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
GRRERIAIRR IENLAARQVT FSKRRRGLFK KAEELSILCD AEVGLAVFSA TGKLFQFPVF  60
GCTFNLTRFL FYLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-19MIKC_MADS family protein