PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000390.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 90aa    MW: 10346.1 Da    PI: 11.9214
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000390.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.31.3e-251059251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rien   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s
  TRIDC4AG000390.4 10 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 59
                      8**********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
GRRERIAIRR IENLAARQVT FSKRRRGLFK KAEELSILCD AEVGLAVFSA TGKLFQFASS  60
RNHLSQVLIL HFLRSSVFHY LTVFVHGLIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.19e-22MIKC_MADS family protein