PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG087730.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 145aa MW: 16095.4 Da PI: 10.0602

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG087730.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	63.6	2.2e-20	24	58	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C C+ttkTplWR gp+g+k+LCnaCG++yrk+++ TRIDC3BG087730.3 24 CDDCNTTKTPLWRGGPNGPKSLCNACGIRYRKRRR 58 99******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
HKMVEVEAAA DPEERTASGD PKACDDCNTT KTPLWRGGPN GPKSLCNACG IRYRKRRRVA 60 MGLDPEDTKA GEEKAGDDEK AAKKTKRTAT THTVELHMVG FAKDAVLKQQ QRRRRQMRRR 120 KPSCLGEEER AAILLMSLSS GVIYA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	54	58	RKRRR
2	54	86	RKRRRVAMGLDPEDTKAGEEKAGDDEKAAKKTK
3	55	59	KRRRV
4	55	86	KRRRVAMGLDPEDTKAGEEKAGDDEKAAKKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49300.1	9e-22	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG087730.3