PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG087730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 184aa MW: 20180.9 Da PI: 9.7751 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.1 | 3.4e-20 | 32 | 66 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C C+ttkTplWR gp+g+k+LCnaCG++yrk+++ TRIDC3BG087730.1 32 CDDCNTTKTPLWRGGPNGPKSLCNACGIRYRKRRR 66 99******************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MSPAEMESHK MVEVEAAADP EERTASGDPK ACDDCNTTKT PLWRGGPNGP KSLCNACGIR 60 YRKRRRVAMG LDPEAKRKPK RDDAALSKAA AEAAAQASTP KTEEEDTKAG EEKAGDDEKA 120 AKKTKRTATT HTVELHMVGF AKDAVLKQQQ RRRRQMRRRK PSCLGEEERA AILLMSLSSG 180 VIYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 66 | RKRRR |
2 | 63 | 67 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-18 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG087730.1 |