PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG079340.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 214aa    MW: 23370.5 Da    PI: 7.694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG079340.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-1367119155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       r+ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ ++ +YI +Lq
  TRIDC3BG079340.2  67 RKISHNAYERDRRKQLNELYSDLRSLLPDtD---HTKKLSIPITVSRVLKYIPELQ 119
                       6889*************************55...7777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
QHQMFEDPFA SSISSLEAEI FSVAGGHHHT QWPGLDHDIP LAPAANNGTS SGGYGSPGGG  60
DGSGSHRKIS HNAYERDRRK QLNELYSDLR SLLPDTDHTK KLSIPITVSR VLKYIPELQK  120
QVDGLEKKKE ELTRASCKPG VLTMKGNTAP IVSATCLDDR EIMVQVSLVS TMAGVLPMSK  180
CIKVLENEGL RLISSSTSAF QNRTFYSLHL QILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-33bHLH family protein