PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG077630.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 454aa    MW: 49393.3 Da    PI: 7.0226
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG077630.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.34.5e-126574491374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilk 92 
                       l++lLl+cA a ssg l +a+a+L+++ +la+pdgd+mqR+aa f+eALa+r +r +++l++al  p++ +  + +e++ a++ f++++P+l+
  TRIDC3BG077630.3  57 LIHLLLNCAAAASSGRLDAANAALEHIATLAAPDGDAMQRVAAAFAEALARRALRAWPGLCRALlLPRAGP--TPAEVAVARRHFFDLCPFLR 147
                       689************************************************************94444444..58899999************ PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++  +aNqaIlea+e+e+ vH+iD++    +QW+ Ll+ La+Rpegpp++R+T+v++    +k+ l++t+  L+k Ae+l+vpf+fn+ v++r
  TRIDC3BG077630.3 148 LAGAAANQAILEAMESEKIVHVIDLGGADATQWLELLHLLAARPEGPPHFRLTAVHE----HKDLLSKTAMALTKEAERLDVPFQFNP-VVSR 235
                       *********************************************************....9**************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrll...........................desvsleserdevLklvkslsPkvvvvveqeadhnse 251
                       l++l++e+Lrvk+gEala++++lqlhrll                               +++s+ d++L ++++lsPkv+vv+eqea+hn++
  TRIDC3BG077630.3 236 LDALDVESLRVKTGEALAISSSLQLHRLLatdddtptaptadkerrrksspdssglL--SPSTSRADAFLGALWGLSPKVMVVAEQEASHNTP 326
                       *************************************************99654321..22333789************************** PP

              GRAS 252 sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                        + erf+eal+yy+alfd+le++++r s er+ vEr llg+ei+n+vac gaerrerhe+l +W +r+e aGF+ vpls++a  qa++  +  
  TRIDC3BG077630.3 327 GLTERFVEALNYYAALFDCLEVGAARGSVERARVERWLLGEEIKNIVACDGAERRERHERLDRWAARMEGAGFGRVPLSYYALLQARRAAQGL 419
                       ********************************************************************************************* PP

              GRAS 345 ksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       + dg++v ee+g+++l+W++r+L+svSaWr
  TRIDC3BG077630.3 420 GCDGFKVREEKGTFFLCWQERALFSVSAWR 449
                       *****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
LMVHQDEGSS SSVTSSPLQN FSNMPLHPHP GAGAAGAGAT PPWMLRELRS DERGLCLIHL  60
LLNCAAAASS GRLDAANAAL EHIATLAAPD GDAMQRVAAA FAEALARRAL RAWPGLCRAL  120
LLPRAGPTPA EVAVARRHFF DLCPFLRLAG AAANQAILEA MESEKIVHVI DLGGADATQW  180
LELLHLLAAR PEGPPHFRLT AVHEHKDLLS KTAMALTKEA ERLDVPFQFN PVVSRLDALD  240
VESLRVKTGE ALAISSSLQL HRLLATDDDT PTAPTADKER RRKSSPDSSG LLSPSTSRAD  300
AFLGALWGLS PKVMVVAEQE ASHNTPGLTE RFVEALNYYA ALFDCLEVGA ARGSVERARV  360
ERWLLGEEIK NIVACDGAER RERHERLDRW AARMEGAGFG RVPLSYYALL QARRAAQGLG  420
CDGFKVREEK GTFFLCWQER ALFSVSAWRG RRFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-127GRAS family protein