PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG077630.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 179aa MW: 20328.2 Da PI: 7.2965 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 182.5 | 2.9e-56 | 29 | 174 | 229 | 374 |
GRAS 229 klvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee 321 + +++lsPkv+vv+eqea+hn++ + erf+eal+yy+alfd+le++++r s er+ vEr llg+ei+n+vac gaerrerhe+l +W +r+e TRIDC3BG077630.2 29 ESLRGLSPKVMVVAEQEASHNTPGLTERFVEALNYYAALFDCLEVGAARGSVERARVERWLLGEEIKNIVACDGAERRERHERLDRWAARMEG 121 5789***************************************************************************************** PP GRAS 322 aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 aGF+ vpls++a qa++ + + dg++v ee+g+++l+W++r+L+svSaWr TRIDC3BG077630.2 122 AGFGRVPLSYYALLQARRAAQGLGCDGFKVREEKGTFFLCWQERALFSVSAWR 174 ****************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence |
MALTKEAERL DVPFQFNPVV SRLDALDVES LRGLSPKVMV VAEQEASHNT PGLTERFVEA 60 LNYYAALFDC LEVGAARGSV ERARVERWLL GEEIKNIVAC DGAERRERHE RLDRWAARME 120 GAGFGRVPLS YYALLQARRA AQGLGCDGFK VREEKGTFFL CWQERALFSV SAWRGRRFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G50420.1 | 3e-51 | GRAS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG077630.2 |