PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG072450.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 603aa MW: 66959.5 Da PI: 10.2405

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.6	1e-08	29	85	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.3 29 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 85 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
LVVAQCRLTG VNPLAQEMAA GALSIKIGKK PRDLLNPKAV NSMQSLFAVK DTLGKRETRE 60 ISALCGLTVT QVREFFASRR TRVRKAVRLS REKALKLEAS KTALKLEASK TALKLEASKT 120 ATNICSLNTE QTPLDIETHA QVVEPLSTLE PLEMFQSSSQ LAEAPQSSLQ QPEVQQCTAT 180 PIPVTPTGMI QPTDAKINPD SVQKETKQEE VAPGVESEDK KFLDSIFALM RKEETFSGQV 240 KLMEWILQIN NATILSWFLT MGGLTIVSTW LSQAATEEQT TVILIIFKVL LHLPLHKALP 300 AHMSVVLQTI NRLRFYRTQD ISGRARNLLS RLSKVLVRSQ ASKKPQKDLI CKQRISEILH 360 DESWRSEVDI TEEILALTEG ASESRKPEPK KTPLLLTASA DESYKKSPVQ TKSKERRKVQ 420 LVEHPNRKAA GKNAHSARST CTNNSRPLSA DDIQKAKMRA MFMQEKYGKV DTSKVSDKPE 480 TTENKKPSGL VNSNEPRMPR SPLTSTAKQP VDPSPSTSIQ NAVPLSDNPE ILATPKLNIA 540 PRETPIEKLD SKRVHWQIPP GIPLLCAPSL AQFLRVLGLS KFNKLLWTTR TSEVVWLMEC 600 SVA

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

LVVAQCRLTG VNPLAQEMAA GALSIKIGKK PRDLLNPKAV NSMQSLFAVK DTLGKRETRE  60
ISALCGLTVT QVREFFASRR TRVRKAVRLS REKALKLEAS KTALKLEASK TALKLEASKT  120
ATNICSLNTE QTPLDIETHA QVVEPLSTLE PLEMFQSSSQ LAEAPQSSLQ QPEVQQCTAT  180
PIPVTPTGMI QPTDAKINPD SVQKETKQEE VAPGVESEDK KFLDSIFALM RKEETFSGQV  240
KLMEWILQIN NATILSWFLT MGGLTIVSTW LSQAATEEQT TVILIIFKVL LHLPLHKALP  300
AHMSVVLQTI NRLRFYRTQD ISGRARNLLS RLSKVLVRSQ ASKKPQKDLI CKQRISEILH  360
DESWRSEVDI TEEILALTEG ASESRKPEPK KTPLLLTASA DESYKKSPVQ TKSKERRKVQ  420
LVEHPNRKAA GKNAHSARST CTNNSRPLSA DDIQKAKMRA MFMQEKYGKV DTSKVSDKPE  480
TTENKKPSGL VNSNEPRMPR SPLTSTAKQP VDPSPSTSIQ NAVPLSDNPE ILATPKLNIA  540
PRETPIEKLD SKRVHWQIPP GIPLLCAPSL AQFLRVLGLS KFNKLLWTTR TSEVVWLMEC  600
SVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	85	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-119	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.3