PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG072450.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 449aa MW: 49800.6 Da PI: 9.5991

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.8e-09	71	127	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.2 71 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 127 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MELAPFKPAA GALVEWGGAG SIPAMVAAQQ QLLHAQADRL QRLVVAQCRL TGVNPLAQEM 60 AAGALSIKIG KKPRDLLNPK AVNSMQSLFA VKDTLGKRET REISALCGLT VTQVREFFAS 120 RRTRVRKAVR LSREKALKLE ASKTATNICS LNTEQTPLDI ETHAQVVEPL STLEPLEMFQ 180 SSSQLAEAPQ SSLQQPEVQQ CTATPIPVTP TGMIQPTDAK INPDSVQKET KQEEVAPGVE 240 SEDKKFLDSI FALMRKEETF SGQVKLMEWI LQINNATILS WFLTMGGLTI VSTWLSQAAT 300 EEQTTVILII FKVLLHLPLH KALPAHMSVV LQTINRLRFY RTQDISGRAR NLLSRLSKVL 360 VRSQASKKPQ KDLICKQRIS EILHDESWRS EVDITEEILA LTEGASESRK PEPKKTPLLL 420 TASADESYKK SPVQTTNLQS PKKEEKFNL

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MELAPFKPAA GALVEWGGAG SIPAMVAAQQ QLLHAQADRL QRLVVAQCRL TGVNPLAQEM  60
AAGALSIKIG KKPRDLLNPK AVNSMQSLFA VKDTLGKRET REISALCGLT VTQVREFFAS  120
RRTRVRKAVR LSREKALKLE ASKTATNICS LNTEQTPLDI ETHAQVVEPL STLEPLEMFQ  180
SSSQLAEAPQ SSLQQPEVQQ CTATPIPVTP TGMIQPTDAK INPDSVQKET KQEEVAPGVE  240
SEDKKFLDSI FALMRKEETF SGQVKLMEWI LQINNATILS WFLTMGGLTI VSTWLSQAAT  300
EEQTTVILII FKVLLHLPLH KALPAHMSVV LQTINRLRFY RTQDISGRAR NLLSRLSKVL  360
VRSQASKKPQ KDLICKQRIS EILHDESWRS EVDITEEILA LTEGASESRK PEPKKTPLLL  420
TASADESYKK SPVQTTNLQS PKKEEKFNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-96	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.2