PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG072450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 820aa MW: 89763.3 Da PI: 7.3633

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.5e-08	71	127	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.1 71 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 127 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 820 aa Download sequence
MELAPFKPAA GALVEWGGAG SIPAMVAAQQ QLLHAQADRL QRLVVAQCRL TGVNPLAQEM 60 AAGALSIKIG KKPRDLLNPK AVNSMQSLFA VKDTLGKRET REISALCGLT VTQVREFFAS 120 RRTRVRKAVR LSREKALKLE ASKTATNICS LNTEQTPLDI ETHAQVVEPL STLEPLEMFQ 180 SSSQLAEAPQ SSLQQPEVQQ CTATPIPVTP TGMIQPTDAK INPDSVQKET KQEEVAPGVE 240 SEDKKFLDSI FALMRKEETF SGQVKLMEWI LQINNATILS WFLTMGGLTI VSTWLSQAAT 300 EEQTTVILII FKVLLHLPLH KALPAHMSVV LQTINRLRFY RTQDISGRAR NLLSRLSKVL 360 VRSQASKKPQ KDLICKQRIS EILHDESWRS EVDITEEILA LTEGASESRK PEPKKTPLLL 420 TASADESYKK SPVQTKSKER RKVQLVEHPN RKAAGKNAHS ARSTCTNNSR PLSADDIQKA 480 KMRAMFMQEK YGKVDTSKVS DKPETTENKK PSGLVNSNEP RMPRSPLTST AKQPVDPSPS 540 TSIQNAVPLS DNPEILATPK LNIAPRETPI EKLDSKRVHW QIPPEVWIDP SWSVSAGENS 600 KELDVQAQRN RREKETFYAS PKDIPSNPKD PWDLEMDFDD SLTPEIPIEQ PPDADTMEVD 660 GVGAAPPNMV VPGEIQQVGS TSSSSLTVAS GANGAASEPD LELLAVLLKN PQLVFALSSN 720 EVGNLPTEQT VALLDMLKQT GLGLSELVNS LPNGAGVPNK PEPVPETIPT SLPSPTPPKD 780 LPASVGWRSD FPTHARPSNS QQAHLPNNGN TPFASEVHKS

Sequence ? help Back to Top

Protein Sequence Length: 820 aa Download sequence

MELAPFKPAA GALVEWGGAG SIPAMVAAQQ QLLHAQADRL QRLVVAQCRL TGVNPLAQEM  60
AAGALSIKIG KKPRDLLNPK AVNSMQSLFA VKDTLGKRET REISALCGLT VTQVREFFAS  120
RRTRVRKAVR LSREKALKLE ASKTATNICS LNTEQTPLDI ETHAQVVEPL STLEPLEMFQ  180
SSSQLAEAPQ SSLQQPEVQQ CTATPIPVTP TGMIQPTDAK INPDSVQKET KQEEVAPGVE  240
SEDKKFLDSI FALMRKEETF SGQVKLMEWI LQINNATILS WFLTMGGLTI VSTWLSQAAT  300
EEQTTVILII FKVLLHLPLH KALPAHMSVV LQTINRLRFY RTQDISGRAR NLLSRLSKVL  360
VRSQASKKPQ KDLICKQRIS EILHDESWRS EVDITEEILA LTEGASESRK PEPKKTPLLL  420
TASADESYKK SPVQTKSKER RKVQLVEHPN RKAAGKNAHS ARSTCTNNSR PLSADDIQKA  480
KMRAMFMQEK YGKVDTSKVS DKPETTENKK PSGLVNSNEP RMPRSPLTST AKQPVDPSPS  540
TSIQNAVPLS DNPEILATPK LNIAPRETPI EKLDSKRVHW QIPPEVWIDP SWSVSAGENS  600
KELDVQAQRN RREKETFYAS PKDIPSNPKD PWDLEMDFDD SLTPEIPIEQ PPDADTMEVD  660
GVGAAPPNMV VPGEIQQVGS TSSSSLTVAS GANGAASEPD LELLAVLLKN PQLVFALSSN  720
EVGNLPTEQT VALLDMLKQT GLGLSELVNS LPNGAGVPNK PEPVPETIPT SLPSPTPPKD  780
LPASVGWRSD FPTHARPSNS QQAHLPNNGN TPFASEVHKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-155	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.1