PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG071600.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 273aa MW: 29571.9 Da PI: 5.0511

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG071600.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	37.7	4.8e-12	25	70	40	85
NF-YB 40 sefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 sefi +++se++d c r+++kti+++ ++ al +lGf++yve++ + TRIDC3BG071600.4 25 SEFINLLSSESNDVCSRDDKKTIAPEHVIRALQDLGFKEYVEEVYA 70 9*****************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
RQYETVSIGR SWTSSNLVYV LLIYSEFINL LSSESNDVCS RDDKKTIAPE HVIRALQDLG 60 FKEYVEEVYA AYEQHKLETL DSPKATKFTG IEMTEEEAVA EQQRMFAEAR ARMNNGAAKP 120 KEPALEPQNQ PQQPPQPQLQ LHPQAQQPPQ PQSQLHHPQS QQPLHPQLQP YTQAPPQQPL 180 HPQLQPYTQA PPQQPLQPPL QLYPQAQPEQ PLQPQSSGST TGTCVISTAA PSTTGTTAAA 240 TAAPAIPAIS TAAPSATPAD ASAAAAATST PAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.4	1e-35	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG071600.4