PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG070190.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 285aa MW: 30103.4 Da PI: 5.8122

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG070190.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.4e-12	97	139	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L TRIDC3BG070190.3 97 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 139 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
GGNPFSVDAP PFLLEAPPPL TVAPGGQKGG FLAPPLSAFG DGMGWDDEDE LDQQSVDASS 60 LGVSASLENA VVGAPGGGGG GGNGKGKKKG MPAKNLMAER RRRKKLNDRL YMLRSVVPKI 120 SKMDRASILG DAIDYLKELL QRISDLHSEL ESAPSSAALG GPSTANSFLP STPTLQPFPG 180 RIKEERCPPA PFPSPSGQQA TVEVRMREGQ AVNIHMFCAR RPGILLSTMR ALDSLGLDIE 240 QAVISCFDGF AMDVFRAEQC REGPGLLPEE IKAVLLHCAG LQNAM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	105	KKKGMPAKNLMAERRRRKK
2	99	106	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12860.1	1e-90	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG070190.3