PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG070170.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 799aa    MW: 89517.1 Da    PI: 6.7557
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG070170.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.26.7e-23129230199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g  W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG070170.3 129 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 217
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG070170.3 218 GESGELRVGVRRA 230
                       49999*****996 PP
2Auxin_resp111.21e-36255336183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tks+F+v+Y+Pr+s+seF+++++++++++k+++s+GmRf+m+fe+e+++e+r++Gt+vg ++ld+  Wp+S+WrsLk
  TRIDC3BG070170.3 255 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ-LWPESNWRSLK 336
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 799 aa     Download sequence    
AARRHGAAAG PLRRYAAGDP LYDELWHACA GPLVTVPRVG DLVFYFPQGH IEQVEASMNQ  60
VAGNQMRLYD LPSKLLCRVI NVELKAEADT DEVYAQVMLM PEPEQNEMAV DKSTSTTGAT  120
PPRPAVRSFC KTLTASDTST HGGFSVLRRH ADECLPPLDM TQSPPTQELV AKDLHGMDWR  180
FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG DAFIFLRGES GELRVGVRRA MRQLSNVPSS  240
VISSHSMHLG VLATAWHAIN TKSMFTVYYK PRTSPSEFII PYDQYMESVK NNYSIGMRFR  300
MRFEGEEAPE QRFTGTIVGS ENLDQLWPES NWRSLKVRWD EPSTIPRPDR VSPWKIEPAS  360
SPPVNPLPLS RVKRPRPNVP PVSPESSVLT KEGATKIDMD SAQAQQRNQN NMVLQGQEHM  420
TLRTNNLTAS NDSDATVQKP MMWSPSPNIG KNHASAFQQR PSMDNWMQLG RCDASSGAQS  480
FGDSQGFFMQ TFDEAPNRHG SFKNQFQDHS SARHFSDPYT KMQTEANEFH FWNSQSTVYG  540
NPRDQSQGFR FEEHPSNWLR QQQFSPVEQP RVIRPHASIA PVDLEKAREG SGFKIFGFKV  600
DTTSTPSNHL SSSMAAIHEP VLQIQASASL TQLQHTHADC IPELSVSTAG TTENEKSIQQ  660
APHSSKDVQS KSHGASTRSC TKVHKQGVAL GRSVDLSKFG DYDELTAELD RMFEFDGELM  720
SSNKDWQIVY TDPEGDMMLV GDDPWEEFCN IVRKIFIYTK EEVQKMNSKS SAPRKEEGSG  780
DADGANEKAH LATSSHLDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1373377KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein