PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG069180.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 90aa MW: 9865.98 Da PI: 9.0869 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77 | 1.4e-24 | 2 | 44 | 9 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 9 rqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rqv fskRr+g++KKA+EL vLCdaeva+++fs+ gklyeys+ TRIDC3BG069180.2 2 RQVRFSKRRAGLFKKAFELAVLCDAEVALLVFSPAGKLYEYST 44 9****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
SRQVRFSKRR AGLFKKAFEL AVLCDAEVAL LVFSPAGKLY EYSTSSIEGT YDRYQRFAGA 60 GTNVNGGDAS SNNDGDPSNI QPRLKEIASW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 1e-26 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG069180.2 |