PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG069180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 150aa    MW: 16435.2 Da    PI: 10.3478
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG069180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.86.8e-24143951
                      HHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  9 rqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rqv fskRr+g++KKA+EL vLCdaeva+++fs+ gklyeys+
  TRIDC3BG069180.1  1 RQVRFSKRRAGLFKKAFELAVLCDAEVALLVFSPAGKLYEYST 43
                      89***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
RQVRFSKRRA GLFKKAFELA VLCDAEVALL VFSPAGKLYE YSTSSIEGTY DRYQRFAGAG  60
TNVNGGDASS NNDGDPSNIQ PRLKEIASWS LQNNADDSDA NKLEKLEKLL TDALRNTKSK  120
KMLAQQNSGS STRSGENSNG PRGQKKRGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.12e-26MIKC_MADS family protein