PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG069110.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 805aa MW: 90847.9 Da PI: 7.2819

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG069110.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	154.4	2.5e-48	15	130	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e+++iL n e + +++ +++rp+sgs++L+nr++ r+fr+DGy+w+kk++gk+ +E+he LKv++v++l+cyYa++e+nptf TRIDC3BG069110.4 15 REvKTRWLKPREVLDILRNCELFGIQNRTPQRPPSGSWFLFNRRVHRFFRNDGYQWQKKRNGKSGNEAHEYLKVDNVKALNCYYARAENNPTF 107 56699************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 rr+yw+Le ++e+ivlvhy++v TRIDC3BG069110.4 108 MRRIYWMLEPAYEHIVLVHYRDV 130 ******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 805 aa Download sequence
MQQQQQGLDI QNLQREVKTR WLKPREVLDI LRNCELFGIQ NRTPQRPPSG SWFLFNRRVH 60 RFFRNDGYQW QKKRNGKSGN EAHEYLKVDN VKALNCYYAR AENNPTFMRR IYWMLEPAYE 120 HIVLVHYRDV LEGSISVSAL NGSPTSYQNG SASRADAHSS PGLTSEIIAP RLLSRSPGSA 180 EELSLENKER HDVTGEILPN HDPNPIPGIQ NEEFDTGTNL ADIFYELEEF SEDNRTEGSQ 240 PYRDPIDVIR NSAWLEEDQL NSFLHSPPVT VDENQWFHIY EVSPEWAFCS ESAKVVIAGD 300 FPSNILWVLF GDVKVPAEIV QQGVIRCYTP SYLGAGKVRM CMLDENGKPC TEAREFGFVE 360 KPTNTMIIGN GKPCSEAREF EFQQRPTKSD NELLLLLNYV QMLFDSHGCE LFSKFRLPLP 420 NVQSGFPVNP SEIIGRTCEQ LDHENAVNCI MEVMLNSKFE DWLSSKFEQN SQGVYLLPKQ 480 YHGVIHTIAA LGYDWALKPL LNNGVPINYR DANGWTALHW AARFGRQQMV AVLVAAGAAV 540 GALSDPTAED PAAKTPASIA SAYGFIGISA FLSEAELTST FHSLESQENG KPVDHNGGVS 600 TSSAVDRVSD KCAHMDGGTD DQLALKDSLG AIRNAVQAAG CIQATFRVFS LKKKKQKALQ 660 NGDSSASPSM LERAALSIQK NFRCWKKRKE YQKVRKNVIK IQARFRAHRE RNKYKELLQS 720 VGILEKIMLR WFRKGVGLRG INSRAMPIDQ DEEEDIVKVF RKERVETAVS EAVSRVSAIV 780 GCPVARLDYR RMLEMHQQAK IGHGK

Sequence ? help Back to Top

Protein Sequence Length: 805 aa Download sequence

MQQQQQGLDI QNLQREVKTR WLKPREVLDI LRNCELFGIQ NRTPQRPPSG SWFLFNRRVH  60
RFFRNDGYQW QKKRNGKSGN EAHEYLKVDN VKALNCYYAR AENNPTFMRR IYWMLEPAYE  120
HIVLVHYRDV LEGSISVSAL NGSPTSYQNG SASRADAHSS PGLTSEIIAP RLLSRSPGSA  180
EELSLENKER HDVTGEILPN HDPNPIPGIQ NEEFDTGTNL ADIFYELEEF SEDNRTEGSQ  240
PYRDPIDVIR NSAWLEEDQL NSFLHSPPVT VDENQWFHIY EVSPEWAFCS ESAKVVIAGD  300
FPSNILWVLF GDVKVPAEIV QQGVIRCYTP SYLGAGKVRM CMLDENGKPC TEAREFGFVE  360
KPTNTMIIGN GKPCSEAREF EFQQRPTKSD NELLLLLNYV QMLFDSHGCE LFSKFRLPLP  420
NVQSGFPVNP SEIIGRTCEQ LDHENAVNCI MEVMLNSKFE DWLSSKFEQN SQGVYLLPKQ  480
YHGVIHTIAA LGYDWALKPL LNNGVPINYR DANGWTALHW AARFGRQQMV AVLVAAGAAV  540
GALSDPTAED PAAKTPASIA SAYGFIGISA FLSEAELTST FHSLESQENG KPVDHNGGVS  600
TSSAVDRVSD KCAHMDGGTD DQLALKDSLG AIRNAVQAAG CIQATFRVFS LKKKKQKALQ  660
NGDSSASPSM LERAALSIQK NFRCWKKRKE YQKVRKNVIK IQARFRAHRE RNKYKELLQS  720
VGILEKIMLR WFRKGVGLRG INSRAMPIDQ DEEEDIVKVF RKERVETAVS EAVSRVSAIV  780
GCPVARLDYR RMLEMHQQAK IGHGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	652	689	KKKKQKALQNGDSSASPSMLERAALSIQKNFRCWKKRK
2	686	715	KKRKEYQKVRKNVIKIQARFRAHRERNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	2e-99	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG069110.4