PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG067620.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 468aa MW: 49092.7 Da PI: 6.448

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG067620.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.3	1.5e-09	271	318	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq TRIDC3BG067620.6 271 SHSLAERVRREKISQRMKLLQDLVPGC----NKVVGKAVMLDEIINYVQSLQ 318 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MNCGPPDQLP PATAGFLNLN WDSSMDAGGH PSPASGSAAA TEGLALHGIS PRPQHYGAGT 60 PLGSPTKLNL SMMGQYRHHN HHYPPPQVGG AGLPTLENLM PMGSLDQFLA DPGFAERAAR 120 LSGFDARGGY GGGPAQFGLP DDGPVGALKE LELGSARDDS SVSDPASAGA GMALKGGSDG 180 NARKRKAAGG SKGKGKDASM STTSAKEDSA SKRCKSTSME DAEENSGKGK AAQSSSENGG 240 KKQGKDGASK LPEPPKDFIH VRARRGEATD SHSLAERVRR EKISQRMKLL QDLVPGCNKV 300 VGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPQLDFNNL PSLLAKDMQQ QSCGQLQQGS 360 SHFPLEASGA PLPYMGQGNG DPLGCGMSDG GMGDDQGAMH PLDQAFCRPM GSSQQQQQHF 420 LSDAASQVGA FWQDLQSVVQ MDMGQSQELA TSSNSYDGSL QTVHMKME

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MNCGPPDQLP PATAGFLNLN WDSSMDAGGH PSPASGSAAA TEGLALHGIS PRPQHYGAGT  60
PLGSPTKLNL SMMGQYRHHN HHYPPPQVGG AGLPTLENLM PMGSLDQFLA DPGFAERAAR  120
LSGFDARGGY GGGPAQFGLP DDGPVGALKE LELGSARDDS SVSDPASAGA GMALKGGSDG  180
NARKRKAAGG SKGKGKDASM STTSAKEDSA SKRCKSTSME DAEENSGKGK AAQSSSENGG  240
KKQGKDGASK LPEPPKDFIH VRARRGEATD SHSLAERVRR EKISQRMKLL QDLVPGCNKV  300
VGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPQLDFNNL PSLLAKDMQQ QSCGQLQQGS  360
SHFPLEASGA PLPYMGQGNG DPLGCGMSDG GMGDDQGAMH PLDQAFCRPM GSSQQQQQHF  420
LSDAASQVGA FWQDLQSVVQ MDMGQSQELA TSSNSYDGSL QTVHMKME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-58	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG067620.6