PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG066560.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 436aa MW: 49794.6 Da PI: 4.4818

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG066560.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	30.5	8.7e-10	2	67	6	81
NF-YB 6 rflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyve 81 +flPia++ rim+k++P n+ i ++a qe v + d c+r + +++gddll +++ Gf+ y + TRIDC3BG066560.1 2 AFLPIADIRRIMRKAIPPNGEIDEEAA---QELVP-------EARGDGCKRARPEAMAGDDLLPEMTKQGFQAYPH 67 69******************99875...45444.......456799**********************9965 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
GAFLPIADIR RIMRKAIPPN GEIDEEAAQE LVPEARGDGC KRARPEAMAG DDLLPEMTKQ 60 GFQAYPHKNR VELPCTMEAE PNPLPVSDAR DWSELPLDAL SAIFMKLGTI EILMGAGLVC 120 RSWLVAAKSP ELWRFVDMTR HKLVFSKGGN VMYKMAKVAI DRSDGRMESF WAQKFVTSEL 180 LNYIASRCNS LKSIRLIGAY YFWDDEDVVI KLAAKCPMLE EIEYSGQKLT WDFFKGIGAA 240 RPALKRLRVC LPWFDSDSIE REIRMEQRQN DEEEEEEEEE PYEAWEARHN EEAFAIAKSL 300 HELRLLQMAG YGLTKKGVYA ILEGCPHLEF LDLRECGHLL VDAELKARCA NIKHVRLPGA 360 WPHAHCPELD TIEEDEGEVI EMPNLYEIEA QALHNEAAMD NDDYGENYWD DYSLPSPPGS 420 PVPTYSMDDP RYYWEL

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

GAFLPIADIR RIMRKAIPPN GEIDEEAAQE LVPEARGDGC KRARPEAMAG DDLLPEMTKQ  60
GFQAYPHKNR VELPCTMEAE PNPLPVSDAR DWSELPLDAL SAIFMKLGTI EILMGAGLVC  120
RSWLVAAKSP ELWRFVDMTR HKLVFSKGGN VMYKMAKVAI DRSDGRMESF WAQKFVTSEL  180
LNYIASRCNS LKSIRLIGAY YFWDDEDVVI KLAAKCPMLE EIEYSGQKLT WDFFKGIGAA  240
RPALKRLRVC LPWFDSDSIE REIRMEQRQN DEEEEEEEEE PYEAWEARHN EEAFAIAKSL  300
HELRLLQMAG YGLTKKGVYA ILEGCPHLEF LDLRECGHLL VDAELKARCA NIKHVRLPGA  360
WPHAHCPELD TIEEDEGEVI EMPNLYEIEA QALHNEAAMD NDDYGENYWD DYSLPSPPGS  420
PVPTYSMDDP RYYWEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.6	9e-11	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG066560.1