PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG066290.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 230aa MW: 24626.3 Da PI: 10.4198 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00065 | 203 | 226 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+++Fs+ L H r H TRIDC3BG066290.7 203 HVCNSCNRTFSSLKGLGDHSRAkH 226 79************9999988766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAKVEGTNSP GKQKGDDKDK TGMQNSSDGV DNESSDQDVD YPRKRTKDDY NPMETPLNTP 60 QGKRAKIATP TTGNKTGYVH VATPHPAAKQ ARKSGDHVHV ATPHPAIKQA RKSGDHVHVA 120 TPHPAAKQAH KSGEHVHVAT PHPAAKQARK SVDRVHVATP HPAAKQACKS GDHVHVVTPH 180 PAAKHARKTL ENNDDKSKQS AGHVCNSCNR TFSSLKGLGD HSRAKHGDAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03740.1 | 2e-06 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG066290.7 |